C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactory receptor 1352
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058991 Olfr1352-201 ENSMUSG00000046493 10090 + 10:78981050-78984721 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyTestisENSMUST00000058991
Transcript ID Brain Kidney Testis
ENSMUST00000058991 0.007±0.00 0.028±0.00 0.030±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000431 CIL_000431_0002 CGP 10:78963309-78984721
CIL_000431 CIL_000431_0003 CGP 10:78981050-79018283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004984 ISA olfactory receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 ISA G-protein coupled receptor signaling pathway
GO:0007608 ISA sensory perception of smell
GO:0016021 ISA integral component of membrane
GO:0050911 IEA detection of chemical stimulus involved in sensory perception of smell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304105 AC005255.6-001 unprocessed_pseudogene Homo_sapiens 0 490
ENST00000304646 OR1F1-001 protein_coding Homo_sapiens 1e-16 92
ENST00000316650 OR56A1-001 protein_coding Homo_sapiens 0.0000000007 69
ENST00000327462 OR7A17-001 protein_coding Homo_sapiens 0 531
ENST00000330728 OR56A4-001 protein_coding Homo_sapiens 0.000000003 68
ENST00000527448 OR5AZ1P-001 unprocessed_pseudogene Homo_sapiens 0.00000000005 73
ENST00000597719 OR7A11P-001 unprocessed_pseudogene Homo_sapiens 0 259

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