C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactory receptor, family 7, subfamily A, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327462 OR7A17-001 ENSG00000185385 9606 - 19:14880426-14881452 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungMuscleTestisENST00000327462
Transcript ID Adipose Brain Breast Colon Liver Lung Muscle Testis
ENST00000327462 0.013±0.00 0.028±0.00 0.026±0.00 0.024±0.00 0.011±0.00 0.498±0.00 0.079±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000431 CIL_000431_0001 CGP 19:14840948-14881452

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004984 IEA olfactory receptor activity
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0050911 IEA detection of chemical stimulus involved in sensory perception of smell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057886 Olfr19-201 protein_coding Mus_musculus 0 634
ENSMUST00000058991 Olfr1352-201 protein_coding Mus_musculus 0 531
ENSMUST00000078854 Olfr346-001 protein_coding Mus_musculus 3e-38 163
ENSMUST00000071437 Olfr339-001 protein_coding Mus_musculus 3e-33 147
ENSMUST00000072854 Olfr340-001 protein_coding Mus_musculus 2e-30 137
ENSMUST00000055130 Olfr350-001 protein_coding Mus_musculus 6e-30 135
ENSMUST00000074192 Olfr342-001 protein_coding Mus_musculus 2e-29 134
ENSMUST00000120380 Olfr337-ps1-001 unprocessed_pseudogene Mus_musculus 8e-29 132
ENSMUST00000072114 Olfr50-001 protein_coding Mus_musculus 8e-29 132
ENSMUST00000120897 Olfr336-ps1-001 unprocessed_pseudogene Mus_musculus 1e-22 111
ENSMUST00000077347 Olfr850-201 protein_coding Mus_musculus 0.0000000007 69
ENSMUST00000072419 Olfr854-201 protein_coding Mus_musculus 0.000000002 68

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