C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HEAT repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059270 Heatr1-201 ENSMUSG00000050244 10090 + 13:12395398-12438677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059270 2.166±1.52 1.933±0.76 2.944±0.09 1.787±0.00 2.048±0.97 1.447±0.47 0.593±0.27 1.429±0.42 1.793±1.11 2.294±0.86 1.443±0.35 3.286±1.85 4.841±3.03 2.560±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J8 CIL_0008J8_0002 VISTA 13:11813964-12415326
CIL_0008J9 CIL_0008J9_0002 VISTA 13:11824772-12428580
CIL_0008IY CIL_0008IY_0002 VISTA 13:11831518-12433920
CIL_00097Y CIL_00097Y_0002 VISTA 13:12065828-12670427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366579 HEATR1-003 protein_coding Homo_sapiens 0 431
ENST00000366581 HEATR1-002 protein_coding Homo_sapiens 0 3061
ENST00000366582 HEATR1-001 protein_coding Homo_sapiens 0 5906

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