C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008IY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2137 VISTA 9606 1:236697312-237300217
GeneTranscriptPositionBiotype
ENSG00000077522 (ACTN2)
actinin, alpha 2 		ENST00000366578 (ACTN2-001) 236686508-236764631 protein_coding
ENST00000461367 (ACTN2-002) 236753899-236762566 processed_transcript
ENST00000492101 (ACTN2-005) 236747700-236748140 processed_transcript
ENST00000492634 (ACTN2-004) 236686527-236744769 processed_transcript
ENST00000494762 (ACTN2-003) 236737019-236742921 processed_transcript
ENST00000542672 (ACTN2-201) 236686454-236764620 protein_coding
ENST00000546208 (ACTN2-202) 236686454-236764620 protein_coding
ENSG00000116984 (MTR)
5-methyltetrahydrofolate-homocysteine methyltransferase 		ENST00000366576 (MTR-002) 236835616-236900418 protein_coding
ENST00000366577 (MTR-001) 236795310-236903981 protein_coding
ENST00000463959 (MTR-004) 236795615-236853088 processed_transcript
ENST00000470570 (MTR-003) 236894341-236900409 processed_transcript
ENST00000535889 (MTR-201) 236795281-236903981 protein_coding
ENSG00000198626 (RYR2)
ryanodine receptor 2 (cardiac) 		ENST00000360064 (RYR2-201) 237270497-237832644 protein_coding
ENST00000366574 (RYR2-001) 237042205-237833988 protein_coding
ENST00000462585 (RYR2-003) 237830032-237832702 processed_transcript
ENST00000466626 (RYR2-002) 237800029-237802375 processed_transcript
ENST00000608590 (RYR2-004) 237791846-237832758 processed_transcript
ENST00000609119 (RYR2-006) 237674764-237786036 processed_transcript
ENST00000609253 (RYR2-005) 237723211-237727142 processed_transcript
ENSG00000226498 (RP11-182B22.2)
 ENST00000414293 (RP11-182B22.2-001) 236819634-236820518 transcribed_processed_pseudogene
ENSG00000237991 (RPL35P1)
ribosomal protein L35 pseudogene 1 		ENST00000450819 (RPL35P1-001) 236981339-236981708 processed_pseudogene
ENSG00000244020 (MT1HL1)
metallothionein 1H-like 1 		ENST00000464121 (MT1HL1-001) 237004103-237004418 protein_coding
ENSG00000252396 (RN7SKP195)
RNA, 7SK small nuclear pseudogene 195 		ENST00000516587 (RN7SKP195-201) 237120807-237121109 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008IY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2137 VISTA 10090 13:11831518-12433920
GeneTranscriptPositionBiotype
ENSMUSG00000021311 (Mtr)
5-methyltetrahydrofolate-homocysteine methyltransferase 		ENSMUST00000099856 (Mtr-201) 12186542-12258113 protein_coding
ENSMUSG00000021313 (Ryr2)
ryanodine receptor 2, cardiac 		ENSMUST00000021750 (Ryr2-201) 11553103-12106945 protein_coding
ENSMUST00000170156 (Ryr2-202) 11553103-12106945 protein_coding
ENSMUSG00000050244 (Heatr1)
HEAT repeat containing 1 		ENSMUST00000059270 (Heatr1-201) 12395398-12438677 protein_coding
ENSMUSG00000052374 (Actn2)
actinin alpha 2 		ENSMUST00000064204 (Actn2-001) 12269426-12340760 protein_coding
ENSMUST00000110616 (Actn2-002) 12308219-12340732 protein_coding
ENSMUST00000168193 (Actn2-201) 12269435-12340724 protein_coding
ENSMUSG00000094185 (Gm5445)
predicted gene 5445 		ENSMUST00000180224 (Gm5445-201) 12378158-12378640 processed_pseudogene
ENSMUSG00000098110 (Gm26956)
predicted gene, 26956 		ENSMUST00000182176 (Gm26956-001) 11939558-11940543 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IY_0001ENSG00000077522ENST00000366578ENST00000461367ENST00000492101ENST00000492634ENST00000494762ENST00000542672ENST00000546208ENSG00000116984ENST00000366576ENST00000366577ENST00000463959ENST00000470570ENST00000535889ENSG00000198626ENST00000360064ENST00000366574ENST00000462585ENST00000466626ENST00000608590ENST00000609119ENST00000609253ENSG00000226498ENST00000414293ENSG00000237991ENST00000450819ENSG00000244020ENST00000464121ENSG00000252396ENST00000516587CIL_0008IY_0002ENSMUSG00000021311ENSMUST00000099856ENSMUSG00000021313ENSMUST00000021750ENSMUST00000170156ENSMUSG00000050244ENSMUST00000059270ENSMUSG00000052374ENSMUST00000064204ENSMUST00000110616ENSMUST00000168193ENSMUSG00000094185ENSMUST00000180224ENSMUSG00000098110ENSMUST00000182176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IY_0001ENSG00000077522ENST00000366578ENST00000461367ENST00000492634ENST00000494762ENST00000542672ENST00000546208ENSG00000116984ENST00000366576ENST00000366577ENST00000463959ENST00000470570ENST00000535889ENSG00000198626ENST00000360064ENST00000366574ENST00000462585ENST00000608590ENST00000609119ENSG00000226498ENST00000414293ENSG00000237991ENST00000450819ENSG00000244020ENST00000464121ENSG00000252396ENST00000516587CIL_0008IY_0002ENSMUSG00000021311ENSMUST00000099856ENSMUSG00000021313ENSMUST00000021750ENSMUST00000170156ENSMUSG00000050244ENSMUST00000059270ENSMUSG00000052374ENSMUST00000064204ENSMUST00000110616ENSMUST00000168193ENSMUSG00000094185ENSMUST00000180224ENSMUSG00000098110ENSMUST00000182176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077522 ENST00000366578 0.049±0.00 N/A 0.053±0.00 2.488±0.86 5.716±5.55 0.231±0.00 119.687±69.39 0.022±0.00 2.244±0.00 0.722±0.10 258.414±17.98 0.121±0.15 0.182±0.20 4.004±3.14
ENST00000461367 0.132±0.00 0.368±0.00 N/A 5.276±0.00 18.971±0.00 N/A 381.940±0.00 0.117±0.08 0.339±0.00 4.710±0.00 466.043±200.18 0.680±0.81 0.923±0.82 12.195±0.00
ENST00000492101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492634 0.075±0.00 0.176±0.00 N/A N/A 4.991±4.79 0.298±0.00 350.503±0.00 0.095±0.08 0.034±0.00 1.394±0.00 436.824±0.00 0.193±0.00 0.357±0.29 5.325±2.83
ENST00000494762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.331±0.00 N/A 11.121±0.00
ENST00000542672 N/A N/A N/A 2.617±0.00 N/A N/A N/A N/A N/A 0.533±0.00 N/A 0.026±0.02 N/A 0.701±0.00
ENST00000546208 N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116984 ENST00000366576 2.949±0.00 2.403±0.00 2.281±0.00 0.796±0.00 2.464±1.22 1.596±0.00 3.090±1.09 1.355±0.00 1.660±1.31 1.930±0.00 1.368±0.00 3.020±0.00 0.910±0.06 3.518±0.00
ENST00000366577 3.420±0.00 1.700±0.00 1.178±0.00 0.863±0.14 2.243±0.50 0.830±0.00 2.553±0.50 1.831±1.64 1.706±0.99 1.138±0.00 1.897±0.93 2.243±1.94 1.752±0.20 2.090±0.95
ENST00000463959 N/A N/A 4.334±0.00 3.642±0.00 5.335±0.00 2.767±0.00 4.138±0.00 N/A 9.099±0.00 N/A 5.872±0.00 3.417±0.00 N/A N/A
ENST00000470570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A 2.773±0.00
ENST00000535889 2.200±0.00 2.388±0.00 N/A 1.542±0.00 N/A 1.924±0.00 2.644±0.00 1.906±0.00 0.220±0.00 1.514±0.00 1.468±0.00 N/A 1.227±0.00 2.674±0.22
ENSG00000198626 ENST00000360064 N/A 0.145±0.00 0.161±0.00 N/A N/A N/A N/A N/A N/A 0.979±0.00 0.078±0.06 N/A N/A 0.244±0.00
ENST00000366574 0.113±0.00 N/A N/A 3.478±1.16 0.344±0.30 0.272±0.00 77.731±36.22 N/A 0.002±0.00 0.399±0.00 N/A 0.213±0.13 0.127±0.04 0.441±0.00
ENST00000462585 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A
ENST00000466626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608590 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.439±0.00 0.576±0.00 1.305±0.00
ENST00000609119 N/A 0.272±0.00 N/A N/A 0.075±0.00 0.287±0.00 78.892±0.00 0.019±0.00 0.009±0.00 N/A N/A 0.132±0.00 0.288±0.00 0.479±0.09
ENST00000609253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226498 ENST00000414293 0.019±0.00 0.119±0.00 0.355±0.00 0.062±0.04 0.351±0.29 0.190±0.13 0.207±0.08 0.020±0.00 0.154±0.14 0.047±0.03 N/A 0.077±0.03 0.040±0.00 0.135±0.01
ENSG00000237991 ENST00000450819 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 1.332±0.72 0.512±0.31 0.125±0.00
ENSG00000244020 ENST00000464121 N/A N/A N/A N/A N/A N/A 1.125±0.00 0.202±0.00 0.177±0.00 N/A N/A N/A N/A 0.272±0.00
ENSG00000252396 ENST00000516587 N/A N/A N/A 0.133±0.00 N/A N/A 3.435±0.18 N/A N/A N/A N/A N/A N/A 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021311 ENSMUST00000099856 2.090±1.30 1.227±0.31 N/A N/A 2.436±1.13 0.626±0.34 N/A 1.704±0.29 1.201±0.53 1.927±0.26 1.001±0.00 2.946±1.99 2.711±0.93 2.299±0.88
ENSMUSG00000021313 ENSMUST00000021750 0.080±0.04 0.117±0.01 0.175±0.03 1.057±0.55 0.027±0.01 0.273±0.09 45.037±15.00 0.022±0.01 0.013±0.01 0.809±0.41 0.007±0.00 0.562±0.33 0.083±0.02 0.047±0.01
ENSMUST00000170156 0.017±0.00 0.117±0.01 N/A 7.304±0.00 0.027±0.01 0.213±0.03 N/A 0.022±0.01 0.008±0.01 0.293±0.00 0.007±0.00 0.498±0.27 0.059±0.03 0.046±0.01
ENSMUSG00000050244 ENSMUST00000059270 2.166±1.52 1.933±0.76 2.944±0.09 1.787±0.00 2.048±0.97 1.447±0.47 0.593±0.27 1.429±0.42 1.793±1.11 2.294±0.86 1.443±0.35 3.286±1.85 4.841±3.03 2.560±1.15
ENSMUSG00000052374 ENSMUST00000064204 0.074±0.02 0.037±0.02 0.370±0.01 1.736±1.29 9.833±9.64 0.653±0.30 175.253±34.93 1.198±1.13 0.573±1.04 6.668±3.17 117.405±26.09 0.342±0.11 0.056±0.03 0.469±0.05
ENSMUST00000110616 N/A 0.026±0.01 N/A N/A 0.376±0.00 0.456±0.17 N/A N/A 0.078±0.05 4.607±0.00 N/A 0.492±0.06 N/A N/A
ENSMUST00000168193 0.105±0.10 0.036±0.01 0.312±0.00 5.758±0.00 12.993±12.95 0.893±0.43 191.144±54.65 1.991±1.91 0.162±0.19 7.754±1.57 66.366±15.98 0.233±0.09 0.161±0.09 0.340±0.02
ENSMUSG00000094185 ENSMUST00000180224 0.126±0.00 0.268±0.00 0.048±0.00 0.009±0.00 N/A N/A 0.107±0.00 N/A 0.046±0.02 N/A 0.208±0.00 0.564±0.31 0.668±0.00 0.116±0.00
ENSMUSG00000098110 ENSMUST00000182176 0.033±0.00 0.093±0.01 0.026±0.01 0.050±0.00 0.199±0.00 0.071±0.00 0.867±0.36 N/A 0.019±0.00 0.039±0.00 0.064±0.00 0.230±0.14 0.058±0.00 N/A

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