C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008J9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2138 VISTA 9606 1:236711218-237313545
GeneTranscriptPositionBiotype
ENSG00000077522 (ACTN2)
actinin, alpha 2 		ENST00000366578 (ACTN2-001) 236686508-236764631 protein_coding
ENST00000461367 (ACTN2-002) 236753899-236762566 processed_transcript
ENST00000492101 (ACTN2-005) 236747700-236748140 processed_transcript
ENST00000492634 (ACTN2-004) 236686527-236744769 processed_transcript
ENST00000494762 (ACTN2-003) 236737019-236742921 processed_transcript
ENST00000542672 (ACTN2-201) 236686454-236764620 protein_coding
ENST00000546208 (ACTN2-202) 236686454-236764620 protein_coding
ENSG00000116984 (MTR)
5-methyltetrahydrofolate-homocysteine methyltransferase 		ENST00000366576 (MTR-002) 236835616-236900418 protein_coding
ENST00000366577 (MTR-001) 236795310-236903981 protein_coding
ENST00000463959 (MTR-004) 236795615-236853088 processed_transcript
ENST00000470570 (MTR-003) 236894341-236900409 processed_transcript
ENST00000535889 (MTR-201) 236795281-236903981 protein_coding
ENSG00000198626 (RYR2)
ryanodine receptor 2 (cardiac) 		ENST00000360064 (RYR2-201) 237270497-237832644 protein_coding
ENST00000366574 (RYR2-001) 237042205-237833988 protein_coding
ENST00000462585 (RYR2-003) 237830032-237832702 processed_transcript
ENST00000466626 (RYR2-002) 237800029-237802375 processed_transcript
ENST00000608590 (RYR2-004) 237791846-237832758 processed_transcript
ENST00000609119 (RYR2-006) 237674764-237786036 processed_transcript
ENST00000609253 (RYR2-005) 237723211-237727142 processed_transcript
ENSG00000226498 (RP11-182B22.2)
 ENST00000414293 (RP11-182B22.2-001) 236819634-236820518 transcribed_processed_pseudogene
ENSG00000237991 (RPL35P1)
ribosomal protein L35 pseudogene 1 		ENST00000450819 (RPL35P1-001) 236981339-236981708 processed_pseudogene
ENSG00000244020 (MT1HL1)
metallothionein 1H-like 1 		ENST00000464121 (MT1HL1-001) 237004103-237004418 protein_coding
ENSG00000252396 (RN7SKP195)
RNA, 7SK small nuclear pseudogene 195 		ENST00000516587 (RN7SKP195-201) 237120807-237121109 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008J9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2138 VISTA 10090 13:11824772-12428580
GeneTranscriptPositionBiotype
ENSMUSG00000021311 (Mtr)
5-methyltetrahydrofolate-homocysteine methyltransferase 		ENSMUST00000099856 (Mtr-201) 12186542-12258113 protein_coding
ENSMUSG00000021313 (Ryr2)
ryanodine receptor 2, cardiac 		ENSMUST00000021750 (Ryr2-201) 11553103-12106945 protein_coding
ENSMUST00000170156 (Ryr2-202) 11553103-12106945 protein_coding
ENSMUSG00000050244 (Heatr1)
HEAT repeat containing 1 		ENSMUST00000059270 (Heatr1-201) 12395398-12438677 protein_coding
ENSMUSG00000052374 (Actn2)
actinin alpha 2 		ENSMUST00000064204 (Actn2-001) 12269426-12340760 protein_coding
ENSMUST00000110616 (Actn2-002) 12308219-12340732 protein_coding
ENSMUST00000168193 (Actn2-201) 12269435-12340724 protein_coding
ENSMUSG00000094185 (Gm5445)
predicted gene 5445 		ENSMUST00000180224 (Gm5445-201) 12378158-12378640 processed_pseudogene
ENSMUSG00000098110 (Gm26956)
predicted gene, 26956 		ENSMUST00000182176 (Gm26956-001) 11939558-11940543 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008J9_0001ENSG00000077522ENST00000366578ENST00000461367ENST00000492101ENST00000492634ENST00000494762ENST00000542672ENST00000546208ENSG00000116984ENST00000366576ENST00000366577ENST00000463959ENST00000470570ENST00000535889ENSG00000198626ENST00000360064ENST00000366574ENST00000462585ENST00000466626ENST00000608590ENST00000609119ENST00000609253ENSG00000226498ENST00000414293ENSG00000237991ENST00000450819ENSG00000244020ENST00000464121ENSG00000252396ENST00000516587CIL_0008J9_0002ENSMUSG00000021311ENSMUST00000099856ENSMUSG00000021313ENSMUST00000021750ENSMUST00000170156ENSMUSG00000050244ENSMUST00000059270ENSMUSG00000052374ENSMUST00000064204ENSMUST00000110616ENSMUST00000168193ENSMUSG00000094185ENSMUST00000180224ENSMUSG00000098110ENSMUST00000182176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008J9_0001ENSG00000077522ENST00000366578ENST00000461367ENST00000492634ENST00000494762ENST00000542672ENST00000546208ENSG00000116984ENST00000366576ENST00000366577ENST00000463959ENST00000470570ENST00000535889ENSG00000198626ENST00000360064ENST00000366574ENST00000462585ENST00000608590ENST00000609119ENSG00000226498ENST00000414293ENSG00000237991ENST00000450819ENSG00000244020ENST00000464121ENSG00000252396ENST00000516587CIL_0008J9_0002ENSMUSG00000021311ENSMUST00000099856ENSMUSG00000021313ENSMUST00000021750ENSMUST00000170156ENSMUSG00000050244ENSMUST00000059270ENSMUSG00000052374ENSMUST00000064204ENSMUST00000110616ENSMUST00000168193ENSMUSG00000094185ENSMUST00000180224ENSMUSG00000098110ENSMUST00000182176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077522 ENST00000366578 0.049±0.00 N/A 0.053±0.00 2.488±0.86 5.716±5.55 0.231±0.00 119.687±69.39 0.022±0.00 2.244±0.00 0.722±0.10 258.414±17.98 0.121±0.15 0.182±0.20 4.004±3.14
ENST00000461367 0.132±0.00 0.368±0.00 N/A 5.276±0.00 18.971±0.00 N/A 381.940±0.00 0.117±0.08 0.339±0.00 4.710±0.00 466.043±200.18 0.680±0.81 0.923±0.82 12.195±0.00
ENST00000492101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492634 0.075±0.00 0.176±0.00 N/A N/A 4.991±4.79 0.298±0.00 350.503±0.00 0.095±0.08 0.034±0.00 1.394±0.00 436.824±0.00 0.193±0.00 0.357±0.29 5.325±2.83
ENST00000494762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.331±0.00 N/A 11.121±0.00
ENST00000542672 N/A N/A N/A 2.617±0.00 N/A N/A N/A N/A N/A 0.533±0.00 N/A 0.026±0.02 N/A 0.701±0.00
ENST00000546208 N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116984 ENST00000366576 2.949±0.00 2.403±0.00 2.281±0.00 0.796±0.00 2.464±1.22 1.596±0.00 3.090±1.09 1.355±0.00 1.660±1.31 1.930±0.00 1.368±0.00 3.020±0.00 0.910±0.06 3.518±0.00
ENST00000366577 3.420±0.00 1.700±0.00 1.178±0.00 0.863±0.14 2.243±0.50 0.830±0.00 2.553±0.50 1.831±1.64 1.706±0.99 1.138±0.00 1.897±0.93 2.243±1.94 1.752±0.20 2.090±0.95
ENST00000463959 N/A N/A 4.334±0.00 3.642±0.00 5.335±0.00 2.767±0.00 4.138±0.00 N/A 9.099±0.00 N/A 5.872±0.00 3.417±0.00 N/A N/A
ENST00000470570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A 2.773±0.00
ENST00000535889 2.200±0.00 2.388±0.00 N/A 1.542±0.00 N/A 1.924±0.00 2.644±0.00 1.906±0.00 0.220±0.00 1.514±0.00 1.468±0.00 N/A 1.227±0.00 2.674±0.22
ENSG00000198626 ENST00000360064 N/A 0.145±0.00 0.161±0.00 N/A N/A N/A N/A N/A N/A 0.979±0.00 0.078±0.06 N/A N/A 0.244±0.00
ENST00000366574 0.113±0.00 N/A N/A 3.478±1.16 0.344±0.30 0.272±0.00 77.731±36.22 N/A 0.002±0.00 0.399±0.00 N/A 0.213±0.13 0.127±0.04 0.441±0.00
ENST00000462585 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A
ENST00000466626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608590 0.234±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.439±0.00 0.576±0.00 1.305±0.00
ENST00000609119 N/A 0.272±0.00 N/A N/A 0.075±0.00 0.287±0.00 78.892±0.00 0.019±0.00 0.009±0.00 N/A N/A 0.132±0.00 0.288±0.00 0.479±0.09
ENST00000609253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226498 ENST00000414293 0.019±0.00 0.119±0.00 0.355±0.00 0.062±0.04 0.351±0.29 0.190±0.13 0.207±0.08 0.020±0.00 0.154±0.14 0.047±0.03 N/A 0.077±0.03 0.040±0.00 0.135±0.01
ENSG00000237991 ENST00000450819 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 1.332±0.72 0.512±0.31 0.125±0.00
ENSG00000244020 ENST00000464121 N/A N/A N/A N/A N/A N/A 1.125±0.00 0.202±0.00 0.177±0.00 N/A N/A N/A N/A 0.272±0.00
ENSG00000252396 ENST00000516587 N/A N/A N/A 0.133±0.00 N/A N/A 3.435±0.18 N/A N/A N/A N/A N/A N/A 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021311 ENSMUST00000099856 2.090±1.30 1.227±0.31 N/A N/A 2.436±1.13 0.626±0.34 N/A 1.704±0.29 1.201±0.53 1.927±0.26 1.001±0.00 2.946±1.99 2.711±0.93 2.299±0.88
ENSMUSG00000021313 ENSMUST00000021750 0.080±0.04 0.117±0.01 0.175±0.03 1.057±0.55 0.027±0.01 0.273±0.09 45.037±15.00 0.022±0.01 0.013±0.01 0.809±0.41 0.007±0.00 0.562±0.33 0.083±0.02 0.047±0.01
ENSMUST00000170156 0.017±0.00 0.117±0.01 N/A 7.304±0.00 0.027±0.01 0.213±0.03 N/A 0.022±0.01 0.008±0.01 0.293±0.00 0.007±0.00 0.498±0.27 0.059±0.03 0.046±0.01
ENSMUSG00000050244 ENSMUST00000059270 2.166±1.52 1.933±0.76 2.944±0.09 1.787±0.00 2.048±0.97 1.447±0.47 0.593±0.27 1.429±0.42 1.793±1.11 2.294±0.86 1.443±0.35 3.286±1.85 4.841±3.03 2.560±1.15
ENSMUSG00000052374 ENSMUST00000064204 0.074±0.02 0.037±0.02 0.370±0.01 1.736±1.29 9.833±9.64 0.653±0.30 175.253±34.93 1.198±1.13 0.573±1.04 6.668±3.17 117.405±26.09 0.342±0.11 0.056±0.03 0.469±0.05
ENSMUST00000110616 N/A 0.026±0.01 N/A N/A 0.376±0.00 0.456±0.17 N/A N/A 0.078±0.05 4.607±0.00 N/A 0.492±0.06 N/A N/A
ENSMUST00000168193 0.105±0.10 0.036±0.01 0.312±0.00 5.758±0.00 12.993±12.95 0.893±0.43 191.144±54.65 1.991±1.91 0.162±0.19 7.754±1.57 66.366±15.98 0.233±0.09 0.161±0.09 0.340±0.02
ENSMUSG00000094185 ENSMUST00000180224 0.126±0.00 0.268±0.00 0.048±0.00 0.009±0.00 N/A N/A 0.107±0.00 N/A 0.046±0.02 N/A 0.208±0.00 0.564±0.31 0.668±0.00 0.116±0.00
ENSMUSG00000098110 ENSMUST00000182176 0.033±0.00 0.093±0.01 0.026±0.01 0.050±0.00 0.199±0.00 0.071±0.00 0.867±0.36 N/A 0.019±0.00 0.039±0.00 0.064±0.00 0.230±0.14 0.058±0.00 N/A

Loading