C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2310057M21 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059438 2310057M21Rik-201 ENSMUSG00000040177 10090 - 7:131342718-131362698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059438
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059438 1.943±0.22 1.708±0.35 2.786±0.18 2.867±0.82 2.011±0.29 1.208±0.17 2.112±0.30 1.839±0.35 1.976±1.19 2.105±0.53 3.625±0.71 2.562±0.71 3.725±1.54 2.817±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0008DB CIL_0008DB_0002 VISTA 7:131163946-131765852
CIL_0009A3 CIL_0009A3_0002 VISTA 7:131196657-131797909
CIL_0007QE CIL_0007QE_0002 VISTA 7:131249727-131851322
CIL_0001B9 CIL_0001B9_0002 CGP 7:131334622-131362698
CIL_0002JF CIL_0002JF_0002 CGP 7:131342718-131387839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368891 C10orf88-002 processed_transcript Homo_sapiens 0 1062
ENST00000368895 RP11-564D11.3-001 transcribed_processed_pseudogene Homo_sapiens 0 809
ENST00000425266 RP11-564D11.3-002 processed_transcript Homo_sapiens 0 340
ENST00000462191 C10orf88-004 processed_transcript Homo_sapiens 0 250
ENST00000470158 C10orf88-003 processed_transcript Homo_sapiens 0 403
ENST00000481909 C10orf88-001 protein_coding Homo_sapiens 0 1072

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