C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 10 open reading frame 88
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481909 C10orf88-001 ENSG00000119965 9606 - 10:122931508-122954403 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000481909
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000481909 1.218±0.00 1.671±0.00 1.302±0.00 1.484±0.00 0.660±0.00 0.765±0.00 3.441±0.00 1.296±0.00 5.940±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DB CIL_0008DB_0001 VISTA 10:122767938-123370218
CIL_0009A3 CIL_0009A3_0001 VISTA 10:122792297-123393555
CIL_0007QE CIL_0007QE_0001 VISTA 10:122843411-123445122
CIL_0001B9 CIL_0001B9_0001 CGP 10:122910701-122954403
CIL_0002JF CIL_0002JF_0001 CGP 10:122930903-122997513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059438 2310057M21Rik-201 protein_coding Mus_musculus 0 1072

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