C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocalcin like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372844 HPCAL4-001 ENSG00000116983 9606 - 1:39678648-39691689 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleOvaryPlacentaTestisENST00000372844
Transcript ID Brain Colon Heart Muscle Ovary Placenta Testis
ENST00000372844 17.892±9.29 0.169±0.00 0.147±0.00 0.533±0.00 1.034±0.64 0.072±0.03 0.815±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IEA calcium channel regulator activity
GO:0005509 IEA calcium ion binding
GO:0005622 IDA intracellular
GO:0007165 IEA signal transduction
GO:0007417 TAS central nervous system development
GO:0008022 IEA protein C-terminus binding
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106246 Hpcal4-002 protein_coding Mus_musculus 0 1314
ENSMUST00000059667 Hpcal4-001 protein_coding Mus_musculus 0 1086
ENSMUST00000152194 Hpcal4-005 protein_coding Mus_musculus 0 699
ENSMUST00000164649 Hpca-202 protein_coding Mus_musculus 0 281
ENSMUST00000030572 Hpca-201 protein_coding Mus_musculus 0 281
ENSMUST00000149763 Hpca-003 protein_coding Mus_musculus 0 281
ENSMUST00000125931 Hpca-006 protein_coding Mus_musculus 0 281
ENSMUST00000139450 Hpca-007 protein_coding Mus_musculus 0 281
ENSMUST00000116442 Hpca-005 protein_coding Mus_musculus 0 281
ENSMUST00000116444 Hpca-001 protein_coding Mus_musculus 0 281
ENSMUST00000095807 Hpca-002 protein_coding Mus_musculus 0 281
ENSMUST00000126995 Hpcal4-003 protein_coding Mus_musculus 4e-23 115
ENSMUST00000135763 Hpca-004 protein_coding Mus_musculus 4e-23 115

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