C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TEA domain family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059768 Tead1-001 ENSMUSG00000055320 10090 + 7:112679320-112906807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059768
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059768 3.913±0.00 5.672±0.24 0.783±0.05 2.485±0.00 2.753±0.44 1.567±0.57 0.268±0.03 7.074±1.20 8.113±0.00 2.798±0.00 2.422±0.61 0.302±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PG CIL_0003PG_0002 CGP 7:112427505-112906807
CIL_0008DD CIL_0008DD_0002 VISTA 7:112524612-113127409
CIL_0003PH CIL_0003PH_0002 CGP 7:112679318-112957457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003143 IGI embryonic heart tube morphogenesis
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IC transcription factor complex
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007507 IMP heart development
GO:0030903 IGI notochord development
GO:0035329 IGI hippo signaling
GO:0042127 IGI regulation of cell proliferation
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048339 IGI paraxial mesoderm development
GO:0048368 IGI lateral mesoderm development
GO:1902459 IGI positive regulation of stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082740 tead1b-201 protein_coding Danio_rerio 0 1009
ENSDART00000121748 TEAD1 (3 of 3)-201 protein_coding Danio_rerio 0 987
ENSDART00000150143 tead1b-001 protein_coding Danio_rerio 0 955
ENSDART00000126108 tead1a-202 protein_coding Danio_rerio 0 483
ENSDART00000064195 tead1a-201 protein_coding Danio_rerio 0 483
ENSDART00000125925 tead1a-001 protein_coding Danio_rerio 0 483
ENSDART00000093199 tead3b-001 protein_coding Danio_rerio 0 361
ENST00000334310 TEAD1-201 protein_coding Homo_sapiens 0 1596
ENST00000358409 TEAD4-002 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000359864 TEAD4-001 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000361985 TEAD1-202 protein_coding Homo_sapiens 0 2435
ENST00000443986 TEAD4-007 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000525312 TEAD1-004 retained_intron Homo_sapiens 0 207
ENST00000526600 TEAD1-007 protein_coding Homo_sapiens 0 2372
ENST00000527376 TEAD1-006 protein_coding Homo_sapiens 0 363
ENST00000527575 TEAD1-002 protein_coding Homo_sapiens 0 1596
ENST00000527636 TEAD1-001 protein_coding Homo_sapiens 0 2180
ENST00000536826 TEAD4-006 protein_coding Homo_sapiens 7e-27 124
ENST00000543035 TEAD4-005 protein_coding Homo_sapiens 6.02558e-44 182

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