C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TEA domain family member 1 (SV40 transcriptional enhancer factor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526600 TEAD1-007 ENSG00000187079 9606 + 11:12879443-12944483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverLungOvaryPlacentaTestisENST00000526600
Transcript ID Bladder Breast Liver Lung Ovary Placenta Testis
ENST00000526600 2.310±0.00 3.065±0.00 3.539±0.00 1.364±0.00 1.407±0.00 2.652±0.00 1.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PG CIL_0003PG_0001 CGP 11:12377185-12944483
CIL_0008DD CIL_0008DD_0001 VISTA 11:12543785-13146999
CIL_0003PH CIL_0003PH_0001 CGP 11:12674591-13012106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035329 IEA hippo signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069256 Tead1-201 protein_coding Mus_musculus 0 2375
ENSMUST00000106638 Tead1-003 protein_coding Mus_musculus 0 2372
ENSMUST00000059768 Tead1-001 protein_coding Mus_musculus 0 2372
ENSMUST00000084705 Tead1-004 protein_coding Mus_musculus 0 2117
ENSMUST00000170352 Tead1-005 protein_coding Mus_musculus 0 1351
ENSMUST00000165036 Tead1-008 protein_coding Mus_musculus 0 1349
ENSMUST00000168981 Tead1-006 protein_coding Mus_musculus 0 1349
ENSMUST00000164363 Tead1-002 protein_coding Mus_musculus 0 1349
ENSMUST00000171197 Tead1-007 protein_coding Mus_musculus 0 573
ENSDART00000126108 tead1a-202 protein_coding Danio_rerio 0 473
ENSDART00000064195 tead1a-201 protein_coding Danio_rerio 0 473
ENSDART00000125925 tead1a-001 protein_coding Danio_rerio 0 473
ENSMUST00000167060 Tead1-011 protein_coding Mus_musculus 0 377

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