C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycoprotein m6b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060210 Gpm6b-002 ENSMUSG00000031342 10090 + X:166238972-166388988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000060210
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000060210 0.450±0.08 1.918±0.00 40.453±1.67 2.522±0.00 0.810±0.10 1.063±0.21 0.339±0.16 0.347±0.10 3.939±1.25 0.345±0.29 2.440±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0005886 IDA plasma membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030501 ISS positive regulation of bone mineralization
GO:0032956 ISS regulation of actin cytoskeleton organization
GO:0045121 IDA membrane raft
GO:0051612 IDA negative regulation of serotonin uptake
GO:0051893 ISS regulation of focal adhesion assembly
GO:0085029 ISS extracellular matrix assembly
GO:2000009 IDA negative regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316715 GPM6B-003 protein_coding Homo_sapiens 0 1520
ENST00000355135 GPM6B-008 protein_coding Homo_sapiens 0 915
ENST00000356942 GPM6B-002 protein_coding Homo_sapiens 0 915
ENST00000398361 GPM6B-005 protein_coding Homo_sapiens 0 915
ENST00000432046 GPM6BP2-001 unprocessed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000442797 GPM6BP3-001 processed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000446387 GPM6BP1-001 unprocessed_pseudogene Homo_sapiens 6.00036e-42 172
ENST00000454189 GPM6B-001 protein_coding Homo_sapiens 0 1053
ENST00000468080 GPM6B-011 protein_coding Homo_sapiens 0 595
ENST00000472735 GPM6B-010 protein_coding Homo_sapiens 0 701
ENST00000475307 GPM6B-004 protein_coding Homo_sapiens 0 355
ENST00000493085 GPM6B-012 protein_coding Homo_sapiens 0 658
ENST00000493677 GPM6B-007 protein_coding Homo_sapiens 0 1408
ENST00000495211 GPM6B-009 protein_coding Homo_sapiens 0 651

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