C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box I1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060271 Foxi1-001 ENSMUSG00000047861 10090 - 11:34204338-34208089 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryTestisENSMUST00000060271
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000060271 0.023±0.00 0.036±0.00 2.561±0.46 0.010±0.00 13.889±0.46 0.015±0.00 0.030±0.02 0.027±0.00 0.181±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OK CIL_0004OK_0002 CGP 11:34046920-34208089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IC nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042472 IMP inner ear morphogenesis
GO:0043565 IDA sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306268 FOXI1-001 protein_coding Homo_sapiens 0 1013
ENST00000388920 FOXI2-001 protein_coding Homo_sapiens 0 294
ENST00000428390 FOXI3-001 protein_coding Homo_sapiens 0 268
ENST00000449804 FOXI1-002 protein_coding Homo_sapiens 0 614
ENST00000506382 WI2-2373I1.1-001 processed_pseudogene Homo_sapiens 0.0000000001 69

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