C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box I3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428390 FOXI3-001 ENSG00000214336 9606 - 2:88446787-88452656 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000428390
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000428390 0.007±0.00 0.127±0.00 0.046±0.03 0.055±0.03 0.007±0.00 0.013±0.00 0.086±0.00 0.025±0.00 0.039±0.03 3.861±1.94 0.413±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069634 Foxi3-201 protein_coding Mus_musculus 0 872
ENSMUST00000163089 Foxi3-001 protein_coding Mus_musculus 0 872
ENSMUST00000060356 Foxi2-201 protein_coding Mus_musculus 0 303
ENSMUST00000060271 Foxi1-001 protein_coding Mus_musculus 0 268
ENSMUST00000179669 Foxg1-201 protein_coding Mus_musculus 5e-20 104
ENSMUST00000021333 Foxg1-001 protein_coding Mus_musculus 5e-20 104
ENSMUST00000156952 Foxg1-004 retained_intron Mus_musculus 5e-20 104
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 6e-19 100
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000179205 Gm5294-201 protein_coding Mus_musculus 0.0000000000002 82

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