C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymocyte selection associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060409 Themis-004 ENSMUSG00000049109 10090 + 10:28668360-28789920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverLungPlacentaTestisENSMUST00000060409
Transcript ID Adipose Heart Kidney Liver Lung Placenta Testis
ENSMUST00000060409 0.018±0.00 0.024±0.01 0.028±0.02 0.011±0.01 0.092±0.00 0.016±0.00 0.114±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005911 IDA cell-cell junction
GO:0008180 IDA COP9 signalosome
GO:0043368 IMP positive T cell selection
GO:0043383 IMP negative T cell selection
GO:0050852 IMP T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368248 THEMIS-201 protein_coding Homo_sapiens 0 1635
ENST00000368250 THEMIS-001 protein_coding Homo_sapiens 0 1635
ENST00000537166 THEMIS-202 protein_coding Homo_sapiens 0 1511
ENST00000610842 THEMIS-203 protein_coding Homo_sapiens 0 1511
ENST00000613862 THEMIS-204 protein_coding Homo_sapiens 0 1635
ENST00000614155 THEMIS-205 protein_coding Homo_sapiens 0 1635

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