C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061280 Pcmtd1-001 ENSMUSG00000051285 10090 + 1:7088920-7173628 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061280 4.751±0.44 4.127±1.14 12.922±0.62 6.137±0.98 4.219±1.21 2.970±0.60 4.639±0.50 5.516±0.53 4.345±1.72 5.893±0.37 11.174±0.66 3.381±1.93 2.210±0.82 0.654±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053O CIL_00053O_0002 CGP 1:6487231-7173628
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004719 IEA protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006479 IEA protein methylation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360540 PCMTD1-002 protein_coding Homo_sapiens 0 1862
ENST00000451824 PCMTD1P3-001 processed_pseudogene Homo_sapiens 0 490
ENST00000455560 PCMTD1P1-001 unprocessed_pseudogene Homo_sapiens 0 431
ENST00000519554 PCMTD1-007 protein_coding Homo_sapiens 0 544
ENST00000519559 PCMTD1-003 processed_transcript Homo_sapiens 0 996
ENST00000519975 PCMTD1-006 retained_intron Homo_sapiens 0 254
ENST00000521046 PCMTD1-005 retained_intron Homo_sapiens 0 549
ENST00000521344 PCMTD1-004 protein_coding Homo_sapiens 0 516
ENST00000522514 PCMTD1-001 protein_coding Homo_sapiens 0 1628
ENST00000544451 PCMTD1-201 protein_coding Homo_sapiens 0 1136
ENST00000565017 PCMTD1P2-001 processed_pseudogene Homo_sapiens 0 424

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