C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucosaminyl (N-acetyl) transferase 3, mucin type
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396065 GCNT3-001 ENSG00000140297 9606 + 15:59611784-59622723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000396065
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000396065 0.085±0.00 0.206±0.00 0.136±0.00 0.761±0.66 4.230±0.00 0.103±0.00 0.059±0.00 0.111±0.00 0.014±0.00 0.320±0.06 0.061±0.00 0.231±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0002426 IEA immunoglobulin production in mucosal tissue
GO:0003829 IEA beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity
GO:0005975 NAS carbohydrate metabolic process
GO:0006493 TAS protein O-linked glycosylation
GO:0008109 IEA N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0047225 IEA acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity
GO:0048729 IEA tissue morphogenesis
GO:0050892 IEA intestinal absorption
GO:0060993 IEA kidney morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061639 Spty2d1-001 protein_coding Mus_musculus 0.0003 53

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