C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS related protein 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062117 Rap2a-201 ENSMUSG00000051615 10090 + 14:120478461-120507194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062117
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062117 8.057±2.28 13.648±5.57 7.722±1.25 10.604±1.02 6.576±2.66 19.921±3.22 3.057±0.34 4.923±0.98 3.777±1.63 21.909±1.11 0.816±0.27 12.877±6.06 5.827±2.54 1.947±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041S CIL_00041S_0002 CGP 14:120275669-120507194
CIL_0000O3 CIL_0000O3_0002 CGP 14:120478461-120948042

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005829 IDA cytosol
GO:0006184 IEA GTP catabolic process
GO:0016020 IDA membrane
GO:0030336 IDA negative regulation of cell migration
GO:0031532 ISS actin cytoskeleton reorganization
GO:0031954 IDA positive regulation of protein autophosphorylation
GO:0032486 IDA Rap protein signal transduction
GO:0034613 ISS cellular protein localization
GO:0045184 ISO establishment of protein localization
GO:0046328 ISS regulation of JNK cascade
GO:0048814 ISS regulation of dendrite morphogenesis
GO:0055037 IDA recycling endosome
GO:0055038 IDA recycling endosome membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109750 CABZ01067868.1-201 protein_coding Danio_rerio 0 569
ENSDART00000058877 rap2ab-001 protein_coding Danio_rerio 0 531
ENSDART00000058967 rap2b-201 protein_coding Danio_rerio 0 508
ENST00000245304 RAP2A-001 protein_coding Homo_sapiens 0 1317
ENST00000323534 RAP2B-001 protein_coding Homo_sapiens 0 562
ENST00000476869 RAP2A-002 nonsense_mediated_decay Homo_sapiens 0 532

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