C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BEN domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062289 Bend6-001 ENSMUSG00000042182 10090 - 1:33852052-33907816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000062289
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000062289 0.445±0.16 1.098±0.02 17.880±15.90 0.179±0.02 0.228±0.08 0.452±0.38 0.095±0.00 0.208±0.11 0.422±0.07 0.188±0.08 1.738±0.77 0.364±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087X CIL_00087X_0002 VISTA 1:33689736-34292240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IGI RNA polymerase II transcription corepressor activity
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0045666 IMP positive regulation of neuron differentiation
GO:0045746 IDA negative regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370746 BEND6-004 protein_coding Homo_sapiens 0 795
ENST00000484701 BEND6-002 processed_transcript Homo_sapiens 0 479

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