C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SERTA domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367012 SERTAD4-001 ENSG00000082497 9606 + 1:210232799-210246255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367012
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367012 0.811±0.00 0.333±0.00 1.050±0.23 0.636±0.42 1.182±0.00 0.220±0.00 0.427±0.00 0.315±0.30 0.610±0.15 0.047±0.00 0.821±0.61 1.092±0.28 0.152±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SY CIL_0007SY_0001 VISTA 1:209936500-210537428
CIL_0008VU CIL_0008VU_0001 VISTA 1:209960353-210563913
CIL_0008NN CIL_0008NN_0001 VISTA 1:209988044-210589005
CIL_0007QS CIL_0007QS_0001 VISTA 1:209991066-210593949
CIL_0009DF CIL_0009DF_0001 VISTA 1:210001167-210602348
CIL_0008NP CIL_0008NP_0001 VISTA 1:210011034-210611642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155579 Sertad4-001 protein_coding Mus_musculus 0 708
ENSMUST00000016406 Sertad4-201 protein_coding Mus_musculus 0 701
ENSMUST00000155503 Sertad4-002 processed_transcript Mus_musculus 0 540
ENSMUST00000165596 Dhx30-201 protein_coding Mus_musculus 0.0002 53
ENSMUST00000062368 Dhx30-009 protein_coding Mus_musculus 0.0002 53
ENSMUST00000111991 Dhx30-005 protein_coding Mus_musculus 0.0002 53

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