C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16433
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062429 Gm16433-201 ENSMUSG00000043024 10090 - 6:108563445-108565693 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062429 0.112±0.02 0.156±0.04 0.048±0.03 0.381±0.28 0.148±0.05 0.107±0.10 0.065±0.04 0.098±0.03 0.281±0.49 0.144±0.04 0.018±0.00 0.156±0.12 0.028±0.02 0.154±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050D CIL_00050D_0002 CGP 6:108213118-108666925

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263239 DDX18-001 protein_coding Homo_sapiens 0 1720
ENST00000415038 DDX18-003 protein_coding Homo_sapiens 0 457
ENST00000450119 DDX18P6-001 processed_pseudogene Homo_sapiens 0 1443
ENST00000461443 DDX18-004 retained_intron Homo_sapiens 0 313
ENST00000474694 DDX18-006 processed_transcript Homo_sapiens 0 704
ENST00000476149 DDX18-005 retained_intron Homo_sapiens 0 678
ENST00000489933 DDX18-002 retained_intron Homo_sapiens 0 239
ENST00000534547 DDX18P5-001 processed_pseudogene Homo_sapiens 0 1160
ENST00000558620 RP11-568G20.2-001 processed_pseudogene Homo_sapiens 0 1203

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