C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150995-ENSG00000134107 CGP 9606 3:4493348-4985323
GeneTranscriptPositionBiotype
ENSG00000134107 (BHLHE40)
basic helix-loop-helix family, member e40 		ENST00000256495 (BHLHE40-001) 4979116-4985323 protein_coding
ENST00000460806 (BHLHE40-003) 4980232-4981610 retained_intron
ENST00000467610 (BHLHE40-002) 4979437-4983268 retained_intron
ENSG00000150995 (ITPR1)
inositol 1,4,5-trisphosphate receptor, type 1 		ENST00000302640 (ITPR1-201) 4493348-4847840 protein_coding
ENST00000354582 (ITPR1-202) 4493348-4847840 protein_coding
ENST00000357086 (ITPR1-001) 4493350-4847602 protein_coding
ENST00000443694 (ITPR1-004) 4516492-4847395 protein_coding
ENST00000456211 (ITPR1-002) 4493350-4847602 protein_coding
ENST00000463980 (ITPR1-011) 4799799-4846861 processed_transcript
ENST00000467056 (ITPR1-003) 4493350-4646008 retained_intron
ENST00000467545 (ITPR1-018) 4795000-4811306 retained_intron
ENST00000472205 (ITPR1-019) 4813047-4818239 retained_intron
ENST00000477577 (ITPR1-005) 4639375-4671786 processed_transcript
ENST00000478515 (ITPR1-020) 4814645-4836948 retained_intron
ENST00000479831 (ITPR1-015) 4768267-4775334 retained_intron
ENST00000481415 (ITPR1-016) 4782340-4787991 retained_intron
ENST00000487016 (ITPR1-013) 4724377-4735625 retained_intron
ENST00000490572 (ITPR1-017) 4800205-4811460 processed_transcript
ENST00000491868 (ITPR1-012) 4596063-4639409 processed_transcript
ENST00000493491 (ITPR1-010) 4799795-4846463 processed_transcript
ENST00000494681 (ITPR1-014) 4711586-4735210 retained_intron
ENST00000544951 (ITPR1-203) 4493348-4847840 protein_coding
ENSG00000235947 (EGOT)
eosinophil granule ontogeny transcript (non-protein coding) 		ENST00000414938 (EGOT-001) 4749192-4751590 lincRNA
ENSG00000235978 (AC018816.3)
 ENST00000441894 (AC018816.3-002) 4814297-4887293 antisense
ENST00000449914 (AC018816.3-001) 4814297-4885788 antisense
ENST00000465436 (AC018816.3-004) 4814294-4856755 antisense
ENST00000474544 (AC018816.3-007) 4814312-4815173 antisense
ENST00000478724 (AC018816.3-006) 4814312-4816276 antisense
ENST00000489771 (AC018816.3-005) 4814305-4831349 antisense
ENST00000496600 (AC018816.3-003) 4814301-4831390 antisense
ENSG00000275981 (EGOT)
EGOT conserved intronic region 		ENST00000621460 (EGOT.1-201) 4750333-4750685 misc_RNA
CIL_00050D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030102-ENSMUSG00000030103 CGP 10090 6:108213118-108666925
GeneTranscriptPositionBiotype
ENSMUSG00000030102 (Itpr1)
inositol 1,4,5-trisphosphate receptor 1 		ENSMUST00000032192 (Itpr1-201) 108213118-108551109 protein_coding
ENSMUSG00000030103 (Bhlhe40)
basic helix-loop-helix family, member e40 		ENSMUST00000032194 (Bhlhe40-001) 108660629-108666925 protein_coding
ENSMUST00000163617 (Bhlhe40-003) 108660874-108662699 protein_coding
ENSMUST00000166346 (Bhlhe40-002) 108660799-108661334 retained_intron
ENSMUSG00000043024 (Gm16433)
predicted gene 16433 		ENSMUST00000062429 (Gm16433-201) 108563445-108565693 pseudogene
ENSMUSG00000090576 (Gm17055)
predicted gene 17055 		ENSMUST00000166951 (Gm17055-001) 108656917-108659417 lincRNA
ENSMUSG00000098674 (Gm27813)
predicted gene, 27813 		ENSMUST00000184343 (Gm27813-201) 108456183-108456536 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050D_0001ENSG00000134107ENST00000256495ENST00000467610ENSG00000150995ENST00000302640ENST00000354582ENST00000357086ENST00000443694ENST00000456211ENST00000463980ENST00000472205ENST00000493491ENSG00000235947ENST00000414938ENSG00000235978ENST00000441894ENSG00000275981ENST00000621460CIL_00050D_0002ENSMUSG00000030102ENSMUST00000032192ENSMUSG00000030103ENSMUST00000032194ENSMUSG00000043024ENSMUST00000062429ENSMUSG00000090576ENSMUST00000166951ENSMUSG00000098674ENSMUST00000184343
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134107 ENST00000256495 N/A N/A 6.437±0.00 9.367±0.00 15.642±0.00 1.620±0.00 5.136±3.31 19.789±11.11 21.667±7.98 9.552±0.53 3.298±0.25 53.746±29.02 20.012±7.16 4.020±0.00
ENST00000460806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467610 N/A N/A 4.582±0.00 N/A 6.298±0.00 N/A 0.766±0.00 N/A N/A N/A 9.212±0.00 N/A N/A 2.537±0.00
ENSG00000150995 ENST00000302640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A
ENST00000354582 N/A N/A N/A 4.967±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357086 N/A 3.469±0.00 1.219±0.00 3.968±0.02 1.681±0.00 1.104±0.00 1.401±0.49 0.141±0.00 13.144±0.00 5.847±0.00 N/A 2.783±1.40 0.955±0.56 3.226±0.00
ENST00000443694 N/A N/A N/A 5.857±0.27 1.100±0.00 1.135±0.45 1.009±0.00 1.931±1.60 N/A 1.953±0.00 0.412±0.00 0.252±0.00 1.274±0.30 1.580±0.59
ENST00000456211 N/A 1.117±0.00 3.647±0.00 N/A 2.545±0.00 1.927±0.00 0.702±0.00 N/A 1.749±1.45 2.345±0.00 0.448±0.00 2.183±1.42 N/A 0.519±0.00
ENST00000463980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.502±0.00 0.956±0.00 1.748±0.58 N/A
ENST00000467056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.335±0.00 N/A N/A N/A
ENST00000477577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.650±0.00 N/A N/A N/A
ENST00000494681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235947 ENST00000414938 N/A 0.107±0.00 N/A 0.226±0.00 0.053±0.00 N/A 0.048±0.01 0.564±0.35 0.016±0.00 0.039±0.00 N/A 0.135±0.07 0.033±0.00 0.239±0.00
ENSG00000235978 ENST00000441894 N/A N/A N/A N/A N/A N/A N/A 8.981±0.00 N/A N/A N/A N/A N/A N/A
ENST00000449914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275981 ENST00000621460 N/A N/A N/A 0.044±0.00 0.526±0.48 N/A N/A N/A 1.156±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030102 ENSMUST00000032192 4.702±2.00 4.502±0.87 15.239±0.00 23.731±23.45 4.467±0.81 3.395±0.70 3.176±0.99 12.755±0.00 2.190±0.81 7.746±2.85 1.586±0.19 9.635±3.12 1.183±0.88 1.850±0.27
ENSMUSG00000030103 ENSMUST00000032194 9.272±3.88 23.618±6.29 10.889±2.79 6.612±7.89 20.117±0.53 18.977±1.63 9.587±3.13 19.344±0.73 7.528±3.93 8.406±0.54 27.211±6.24 10.637±9.52 20.439±9.96 0.906±0.27
ENSMUST00000163617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043024 ENSMUST00000062429 0.112±0.02 0.156±0.04 0.048±0.03 0.381±0.28 0.148±0.05 0.107±0.10 0.065±0.04 0.098±0.03 0.281±0.49 0.144±0.04 0.018±0.00 0.156±0.12 0.028±0.02 0.154±0.02
ENSMUSG00000090576 ENSMUST00000166951 0.143±0.06 0.100±0.03 N/A 0.035±0.01 0.177±0.10 0.456±0.11 0.148±0.05 0.116±0.07 0.102±0.07 0.306±0.07 0.379±0.13 0.269±0.09 0.234±0.13 0.104±0.03
ENSMUSG00000098674 ENSMUST00000184343 0.276±0.00 N/A 0.208±0.00 0.064±0.02 0.473±0.12 N/A 0.364±0.00 0.271±0.08 0.106±0.10 0.230±0.00 N/A 0.639±0.00 0.141±0.09 0.405±0.00

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