C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tigger transposable element derived 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062626 Tigd2-001 ENSMUSG00000049232 10090 + 6:59208870-59212033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062626 2.082±0.34 9.964±1.20 2.596±0.33 1.746±0.73 5.456±2.11 3.694±0.46 1.412±0.26 2.078±0.31 1.980±0.65 3.798±0.68 3.085±0.30 4.634±0.93 1.832±0.49 1.345±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KM CIL_0000KM_0002 CGP 6:58932090-59212033
CIL_0000KL CIL_0000KL_0002 CGP 6:59208870-59426290

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317005 TIGD2-001 protein_coding Homo_sapiens 0 1788

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