C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tigger transposable element derived 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317005 TIGD2-001 ENSG00000180346 9606 + 4:89112817-89114899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000317005
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000317005 0.745±0.00 1.342±0.00 0.649±0.00 1.542±0.27 0.579±0.08 0.286±0.03 1.895±0.00 1.230±0.42 0.434±0.00 0.472±0.23 1.426±1.18 1.884±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KM CIL_0000KM_0001 CGP 4:88725955-89114899
CIL_0000KL CIL_0000KL_0001 CGP 4:89112817-89308010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062626 Tigd2-001 protein_coding Mus_musculus 0 1788

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