C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fucosyltransferase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062804 Fut8-201 ENSMUSG00000021065 10090 + 12:77239065-77476338 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000062804
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000062804 1.797±0.54 19.243±3.25 0.968±0.25 3.307±1.74 8.955±2.20 1.865±0.63 5.700±2.18 0.774±0.32 6.138±1.34 6.113±2.11 2.506±0.67 5.453±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PC CIL_0001PC_0002 CGP 12:76937269-77476338
CIL_0001KA CIL_0001KA_0003 CGP 12:77238104-78684767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0007179 IMP transforming growth factor beta receptor signaling pathway
GO:0007229 IMP integrin-mediated signaling pathway
GO:0007585 IMP respiratory gaseous exchange
GO:0008424 ISS glycoprotein 6-alpha-L-fucosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016477 IMP cell migration
GO:0016757 ISA transferase activity, transferring glycosyl groups
GO:0017124 IEA SH3 domain binding
GO:0018279 ISS protein N-linked glycosylation via asparagine
GO:0032580 IEA Golgi cisterna membrane
GO:0033578 IEA protein glycosylation in Golgi
GO:0036065 IMP fucosylation
GO:0036071 IEA N-glycan fucosylation
GO:0043112 IMP receptor metabolic process
GO:0046368 ISS GDP-L-fucose metabolic process
GO:0046921 IMP alpha-(1->6)-fucosyltransferase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342677 FUT8-005 nonsense_mediated_decay Homo_sapiens 0 1363
ENST00000358307 FUT8-002 protein_coding Homo_sapiens 0 1962
ENST00000360689 FUT8-001 protein_coding Homo_sapiens 0 2791
ENST00000394586 FUT8-003 protein_coding Homo_sapiens 0 2789
ENST00000553924 FUT8-013 protein_coding Homo_sapiens 0 222
ENST00000554610 FUT8-007 protein_coding Homo_sapiens 0 335
ENST00000554667 FUT8-012 protein_coding Homo_sapiens 0 346
ENST00000554765 FUT8-014 processed_transcript Homo_sapiens 0 448
ENST00000555559 FUT8-010 protein_coding Homo_sapiens 0 324
ENST00000556518 FUT8-006 protein_coding Homo_sapiens 0 281
ENST00000557164 FUT8-004 protein_coding Homo_sapiens 0 2359
ENST00000557338 FUT8-011 protein_coding Homo_sapiens 0 366
ENST00000557536 FUT8-015 processed_transcript Homo_sapiens 0 507

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