C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001PC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125952-ENSG00000033170 CGP 9606 14:65006174-65744121
GeneTranscriptPositionBiotype
ENSG00000033170 (FUT8)
fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 		ENST00000342677 (FUT8-005) 65411865-65743142 nonsense_mediated_decay
ENST00000358307 (FUT8-002) 65413008-65743142 protein_coding
ENST00000360689 (FUT8-001) 65410592-65744121 protein_coding
ENST00000394586 (FUT8-003) 65411122-65743142 protein_coding
ENST00000549235 (FUT8-008) 65411891-65458188 processed_transcript
ENST00000553924 (FUT8-013) 65413006-65561610 protein_coding
ENST00000554610 (FUT8-007) 65413022-65561697 protein_coding
ENST00000554667 (FUT8-012) 65488318-65561702 protein_coding
ENST00000554765 (FUT8-014) 65636517-65721858 processed_transcript
ENST00000555559 (FUT8-010) 65411936-65561685 protein_coding
ENST00000556292 (FUT8-009) 65413069-65458188 processed_transcript
ENST00000556518 (FUT8-006) 65411863-65561652 protein_coding
ENST00000557164 (FUT8-004) 65411874-65742936 protein_coding
ENST00000557338 (FUT8-011) 65413019-65561715 protein_coding
ENST00000557536 (FUT8-015) 65636516-65721912 processed_transcript
ENSG00000125952 (MAX)
MYC associated factor X 		ENST00000246163 (MAX-005) 65083744-65102509 protein_coding
ENST00000284165 (MAX-004) 65075202-65102488 protein_coding
ENST00000341653 (MAX-003) 65006174-65102387 protein_coding
ENST00000358402 (MAX-001) 65075124-65102504 protein_coding
ENST00000358664 (MAX-002) 65075544-65102470 protein_coding
ENST00000394606 (MAX-008) 65075127-65102519 nonsense_mediated_decay
ENST00000553928 (MAX-007) 65076458-65102360 nonsense_mediated_decay
ENST00000553951 (MAX-009) 65077193-65101685 retained_intron
ENST00000554709 (MAX-016) 65093703-65102517 retained_intron
ENST00000555419 (MAX-012) 65076086-65102339 protein_coding
ENST00000555667 (MAX-010) 65077301-65102517 protein_coding
ENST00000555932 (MAX-011) 65075158-65102470 protein_coding
ENST00000556443 (MAX-014) 65077774-65102517 protein_coding
ENST00000556702 (MAX-015) 65093498-65102478 retained_intron
ENST00000556892 (MAX-017) 65076609-65102695 protein_coding
ENST00000556979 (MAX-006) 65077287-65102517 protein_coding
ENST00000557277 (MAX-018) 65076462-65102690 protein_coding
ENST00000557746 (MAX-013) 65077385-65102517 protein_coding
ENST00000618858 (MAX-201) 65075124-65102544 protein_coding
ENSG00000125954 (CHURC1-FNTB)
CHURC1-FNTB readthrough 		ENST00000549987 (CHURC1-FNTB-001) 64914493-65061361 protein_coding
ENST00000551823 (CHURC1-FNTB-003) 64924036-65015683 nonsense_mediated_decay
ENST00000552941 (CHURC1-FNTB-002) 64914485-65061803 nonsense_mediated_decay
ENST00000553743 (CHURC1-FNTB-004) 64924036-65015675 protein_coding
ENSG00000180662 (RPL21P8)
ribosomal protein L21 pseudogene 8 		ENST00000465083 (RPL21P8-001) 65467807-65468341 processed_pseudogene
ENSG00000214759 (CTD-2509G16.1)
 ENST00000484315 (CTD-2509G16.1-001) 65268829-65269098 processed_pseudogene
ENSG00000255002 (CTD-2509G16.2)
 ENST00000531609 (CTD-2509G16.2-001) 65212893-65222347 lincRNA
ENSG00000257365 (FNTB)
farnesyltransferase, CAAX box, beta 		ENST00000246166 (FNTB-001) 64986720-65062598 protein_coding
ENST00000554210 (FNTB-004) 65012172-65032392 retained_intron
ENST00000554334 (FNTB-002) 65015538-65062652 retained_intron
ENST00000555372 (FNTB-006) 64986895-65022130 processed_transcript
ENST00000555618 (FNTB-007) 65027387-65027781 retained_intron
ENST00000555742 (FNTB-003) 64987215-65027599 processed_transcript
ENST00000556709 (FNTB-005) 65016504-65040827 processed_transcript
ENST00000557300 (FNTB-008) 65053160-65061405 retained_intron
ENSG00000258613 (RPL21P7)
ribosomal protein L21 pseudogene 7 		ENST00000557463 (RPL21P7-001) 65266638-65267690 processed_pseudogene
ENSG00000258760 (CTD-2509G16.5)
 ENST00000553754 (CTD-2509G16.5-001) 65253701-65318790 lincRNA
ENST00000555736 (CTD-2509G16.5-002) 65236480-65302680 lincRNA
ENSG00000258980 (EIF1AXP2)
eukaryotic translation initiation factor 1A, X-linked pseudogene 2 		ENST00000555940 (EIF1AXP2-001) 65528830-65529574 processed_pseudogene
ENSG00000259078 (PTBP1P)
polypyrimidine tract binding protein 1 pseudogene 		ENST00000554374 (PTBP1P-001) 65279267-65281166 processed_pseudogene
ENSG00000264620 (AL139022.1)
 ENST00000577601 (AL139022.1-201) 65014715-65014814 miRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0001PC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059436-ENSMUSG00000021065 CGP 10090 12:76937269-77476338
GeneTranscriptPositionBiotype
ENSMUSG00000021065 (Fut8)
fucosyltransferase 8 		ENSMUST00000062804 (Fut8-201) 77239065-77476338 protein_coding
ENSMUST00000171770 (Fut8-202) 77238104-77475996 protein_coding
ENSMUST00000177595 (Fut8-203) 77238104-77475996 protein_coding
ENSMUSG00000059436 (Max)
Max protein 		ENSMUST00000082136 (Max-201) 76937269-76962248 protein_coding
ENSMUST00000110395 (Max-202) 76937269-76962248 protein_coding
ENSMUSG00000064833 (Gm25926)
predicted gene, 25926 		ENSMUST00000082899 (Gm25926-201) 77418417-77418576 snRNA

Mus musculus Ensembl (GRCm38)

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PC_0001ENSG00000033170ENST00000342677ENST00000358307ENST00000360689ENST00000394586ENST00000557164ENSG00000125952ENST00000246163ENST00000284165ENST00000358402ENST00000358664ENST00000394606ENST00000554709ENST00000555932ENST00000556979ENST00000557746ENSG00000125954ENST00000549987ENSG00000180662ENST00000465083ENSG00000214759ENST00000484315ENSG00000255002ENST00000531609ENSG00000257365ENST00000246166ENSG00000258613ENST00000557463ENSG00000258760ENST00000553754ENST00000555736ENSG00000258980ENST00000555940ENSG00000259078ENST00000554374ENSG00000264620ENST00000577601CIL_0001PC_0002ENSMUSG00000021065ENSMUST00000062804ENSMUST00000171770ENSMUSG00000059436ENSMUST00000082136ENSMUST00000110395ENSMUSG00000064833ENSMUST00000082899
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033170 ENST00000342677 1.260±0.00 2.157±0.00 0.757±0.00 7.677±3.86 8.432±6.44 2.902±1.18 1.020±0.31 1.074±0.57 3.772±3.56 3.501±0.99 0.183±0.00 5.127±2.52 7.706±4.56 7.040±2.27
ENST00000358307 N/A N/A N/A N/A N/A N/A N/A 0.804±0.00 0.073±0.00 N/A N/A N/A 1.424±0.00 N/A
ENST00000360689 N/A N/A N/A 2.492±0.00 N/A 0.274±0.00 0.169±0.00 N/A N/A N/A N/A 0.470±0.00 N/A 1.063±0.00
ENST00000394586 N/A N/A N/A N/A N/A 1.655±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557164 2.365±0.00 3.487±0.00 1.997±0.00 8.111±0.68 5.297±2.26 2.561±0.92 1.167±0.07 1.960±0.00 1.623±1.34 1.961±0.92 1.551±0.00 5.358±1.14 4.324±2.61 4.994±1.76
ENST00000557338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125952 ENST00000246163 N/A N/A N/A N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A N/A N/A N/A
ENST00000284165 N/A 3.508±0.00 N/A 2.819±0.00 N/A N/A N/A N/A N/A 4.354±1.69 1.188±0.00 3.173±0.82 N/A N/A
ENST00000341653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000358402 22.978±0.00 23.247±0.00 1.380±0.00 11.600±2.41 16.423±10.05 13.200±9.00 8.793±6.30 10.761±5.58 8.769±3.63 13.319±5.99 6.405±1.55 25.952±13.80 27.300±2.69 28.095±0.00
ENST00000358664 N/A N/A 1.868±0.00 N/A N/A 3.835±0.00 5.661±1.52 N/A N/A 6.362±0.00 N/A 5.001±0.62 12.356±0.00 7.492±0.00
ENST00000394606 N/A N/A N/A N/A N/A 6.217±0.00 N/A N/A N/A N/A 3.186±0.00 N/A N/A N/A
ENST00000553928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554709 N/A N/A 7.205±0.00 N/A N/A N/A 12.494±0.00 N/A N/A N/A N/A 14.649±0.00 29.370±0.00 N/A
ENST00000555419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555932 N/A N/A N/A N/A N/A N/A N/A 4.081±0.00 2.191±0.00 N/A N/A 9.485±0.00 15.329±0.00 7.879±0.00
ENST00000556443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556979 N/A N/A 2.011±0.00 7.246±0.00 N/A N/A N/A 3.018±0.00 13.494±0.00 N/A N/A N/A N/A N/A
ENST00000557277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557746 N/A N/A N/A N/A N/A 7.302±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125954 ENST00000549987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.277±0.00 N/A N/A N/A
ENST00000551823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180662 ENST00000465083 N/A 0.124±0.00 0.751±0.00 N/A 0.072±0.00 0.181±0.11 N/A 0.025±0.00 0.245±0.22 0.493±0.40 0.291±0.00 0.055±0.01 0.042±0.00 0.119±0.01
ENSG00000214759 ENST00000484315 N/A 0.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.262±0.14 N/A 0.122±0.00
ENSG00000255002 ENST00000531609 0.125±0.00 0.422±0.00 0.048±0.00 0.208±0.00 0.122±0.00 0.090±0.00 0.073±0.00 0.302±0.00 0.058±0.00 0.101±0.00 0.007±0.00 0.086±0.00 0.027±0.00 0.233±0.00
ENSG00000257365 ENST00000246166 N/A N/A 1.421±0.00 7.058±0.00 7.344±0.00 2.508±0.00 N/A 4.173±0.00 3.794±0.00 N/A N/A 7.109±2.21 6.335±2.01 9.167±1.52
ENST00000554210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258613 ENST00000557463 0.085±0.00 1.124±0.00 N/A 0.180±0.00 0.145±0.00 0.218±0.00 0.028±0.00 0.030±0.00 0.027±0.00 0.365±0.00 0.107±0.00 0.135±0.05 0.095±0.00 0.026±0.00
ENSG00000258760 ENST00000553754 N/A 0.275±0.00 N/A N/A 0.023±0.00 1.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555736 0.201±0.00 0.728±0.00 N/A 0.116±0.00 0.108±0.00 0.066±0.00 0.215±0.00 0.070±0.00 0.120±0.00 0.436±0.00 0.171±0.00 N/A 0.113±0.00 0.189±0.07
ENSG00000258980 ENST00000555940 N/A N/A N/A N/A 1.477±0.00 N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.023±0.00
ENSG00000259078 ENST00000554374 N/A 0.136±0.00 N/A N/A 0.095±0.00 0.033±0.00 N/A N/A N/A 0.070±0.00 N/A 0.246±0.11 0.046±0.00 0.059±0.02
ENSG00000264620 ENST00000577601 0.505±0.00 7.596±0.00 N/A 5.002±0.00 1.980±0.00 1.767±0.00 0.802±0.00 1.412±0.00 0.784±0.00 0.581±0.00 N/A 48.128±0.00 N/A 1.489±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021065 ENSMUST00000062804 1.797±0.54 19.243±3.25 N/A 0.968±0.25 3.307±1.74 8.955±2.20 1.865±0.63 5.700±2.18 0.774±0.32 6.138±1.34 N/A 6.113±2.11 2.506±0.67 5.453±0.91
ENSMUST00000171770 1.037±0.16 N/A 2.207±0.51 6.890±4.16 1.374±1.05 2.384±0.39 0.536±0.12 2.445±0.59 1.713±1.13 1.281±0.06 4.528±0.57 27.320±16.57 21.194±10.82 2.191±1.99
ENSMUST00000177595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059436 ENSMUST00000082136 10.599±3.54 7.926±0.79 17.504±3.04 12.261±3.60 7.972±4.20 28.285±3.91 2.908±0.54 9.522±1.00 10.859±6.54 12.654±2.11 2.416±0.98 17.074±1.76 27.576±10.96 2.677±1.37
ENSMUST00000110395 6.244±2.50 3.985±1.47 5.925±0.90 4.552±0.55 5.184±1.57 12.662±0.52 6.494±1.44 4.410±0.56 4.604±2.79 8.650±1.48 3.306±1.26 6.103±1.06 13.646±5.32 1.221±0.75
ENSMUSG00000064833 ENSMUST00000082899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.669±1.61 N/A

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