C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, delta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062931 Gjd3-001 ENSMUSG00000047197 10090 - 11:98982180-98983016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000062931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000062931 0.277±0.21 0.208±0.07 0.311±0.08 0.817±0.12 0.316±0.15 1.032±0.40 0.591±0.20 0.164±0.11 0.046±0.02 0.148±0.08 1.854±0.98 0.069±0.03 0.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_00050G CIL_00050G_0002 CGP 11:98927818-98983016
CIL_0007HC CIL_0007HC_0002 CGP 11:98982180-99024189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IDA ion channel activity
GO:0005243 IEA gap junction channel activity
GO:0005515 IEA protein binding
GO:0005921 IDA gap junction
GO:0005922 ISS connexon complex
GO:0007154 IEA cell communication
GO:0009749 IEA response to glucose
GO:0009986 ISS cell surface
GO:0016021 IEA integral component of membrane
GO:0016264 ISS gap junction assembly
GO:0034220 IDA ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000578689 GJD3-001 protein_coding Homo_sapiens 0 881

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