C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R-spondin 2 homolog (Xenopus laevis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063492 Rspo2-201 ENSMUSG00000051920 10090 - 15:43020811-43170818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063492
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063492 0.033±0.01 0.019±0.01 2.368±1.80 0.170±0.05 0.082±0.03 0.030±0.00 0.011±0.00 0.030±0.02 0.148±0.02 0.024±0.01 1.066±0.42 0.020±0.01 0.049±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000608 CIL_000608_0002 CGP 15:42424727-43170818
CIL_0004T1 CIL_0004T1_0003 CGP 15:43020811-43282736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IGI osteoblast differentiation
GO:0005102 IEA receptor binding
GO:0005576 IDA extracellular region
GO:0008201 IDA heparin binding
GO:0009986 IDA cell surface
GO:0016055 IEA Wnt signaling pathway
GO:0030282 IGI bone mineralization
GO:0035115 IGI embryonic forelimb morphogenesis
GO:0035116 IGI embryonic hindlimb morphogenesis
GO:0060437 IMP lung growth
GO:0060441 IMP epithelial tube branching involved in lung morphogenesis
GO:0060535 IGI trachea cartilage morphogenesis
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276659 RSPO2-001 protein_coding Homo_sapiens 0 1162
ENST00000517781 RSPO2-002 protein_coding Homo_sapiens 0 652
ENST00000517939 RSPO2-003 protein_coding Homo_sapiens 0 970
ENST00000520026 RSPO2-006 protein_coding Homo_sapiens 0 425
ENST00000521502 RSPO2-008 protein_coding Homo_sapiens 0 883
ENST00000521757 RSPO2-007 protein_coding Homo_sapiens 0 592
ENST00000521956 RSPO2-005 protein_coding Homo_sapiens 0 640
ENST00000522333 RSPO2-004 protein_coding Homo_sapiens 0 414

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