C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin (beta)-like 1X-linked receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063988 Tbl1xr1-201 ENSMUSG00000027630 10090 + 3:22076652-22216594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063988 6.522±1.83 10.302±1.20 5.157±1.47 5.986±0.32 8.915±2.09 9.422±1.39 3.647±0.68 6.062±0.96 3.684±1.37 9.121±1.66 1.685±0.73 9.551±3.60 3.866±1.62 4.425±1.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003714 IMP transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IC nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141612 tbl1xr1a-002 protein_coding Danio_rerio 0 1271
ENSDART00000146360 tbl1xr1b-001 protein_coding Danio_rerio 0 1149
ENSDART00000085132 tbl1xr1b-202 protein_coding Danio_rerio 0 1096
ENSDART00000022663 tbl1xr1b-201 protein_coding Danio_rerio 0 771
ENST00000346432 TBL1Y-003 protein_coding Homo_sapiens 0 601
ENST00000352800 TBL1XR1-003 protein_coding Homo_sapiens 0 619
ENST00000355162 TBL1Y-002 protein_coding Homo_sapiens 0 601
ENST00000383032 TBL1Y-001 protein_coding Homo_sapiens 0 601
ENST00000407841 RP11-325O24.2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000413084 TBL1XR1-013 protein_coding Homo_sapiens 0 239
ENST00000422066 TBL1XR1-011 protein_coding Homo_sapiens 0 501
ENST00000422442 TBL1XR1-005 protein_coding Homo_sapiens 0 368
ENST00000424913 TBL1XR1-009 protein_coding Homo_sapiens 0 505
ENST00000427349 TBL1XR1-006 protein_coding Homo_sapiens 0 342
ENST00000428970 TBL1XR1-007 protein_coding Homo_sapiens 0 514
ENST00000430069 TBL1XR1-001 protein_coding Homo_sapiens 0 3072
ENST00000431421 TBL1XR1-014 protein_coding Homo_sapiens 0 440
ENST00000431674 TBL1XR1-012 protein_coding Homo_sapiens 0 486
ENST00000437738 TBL1XR1-010 protein_coding Homo_sapiens 0 621
ENST00000440297 TBL1YP1-001 unprocessed_pseudogene Homo_sapiens 0.00000000000002 84
ENST00000443315 TBL1XR1-008 protein_coding Homo_sapiens 0 420
ENST00000450267 TBL1XR1-017 protein_coding Homo_sapiens 0 532
ENST00000457928 TBL1XR1-002 protein_coding Homo_sapiens 0 3072
ENST00000474363 TBL1XR1-004 retained_intron Homo_sapiens 0 1020
ENST00000568952 RP11-325O24.5-001 processed_pseudogene Homo_sapiens 0 309
ENST00000624573 TBL1Y-201 protein_coding Homo_sapiens 0 601

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