C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 39A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064129 Ttc39a-001 ENSMUSG00000028555 10090 + 4:109407087-109444745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064129 1.702±1.47 3.837±0.77 3.985±0.80 0.406±0.00 5.462±0.59 63.147±2.90 0.418±0.20 1.198±0.15 3.633±4.52 6.752±0.46 0.067±0.00 6.474±1.83 12.336±3.41 11.723±2.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262675 TTC39A-017 protein_coding Homo_sapiens 0 2235
ENST00000262676 TTC39A-002 protein_coding Homo_sapiens 0 584
ENST00000371747 TTC39A-003 protein_coding Homo_sapiens 0 939
ENST00000371750 TTC39A-005 protein_coding Homo_sapiens 0 2235
ENST00000380849 TTC39A-007 protein_coding Homo_sapiens 0 477
ENST00000401051 TTC39A-010 protein_coding Homo_sapiens 0 477
ENST00000411642 TTC39A-012 protein_coding Homo_sapiens 0 1066
ENST00000413473 TTC39A-001 protein_coding Homo_sapiens 0 2235
ENST00000422925 TTC39A-008 protein_coding Homo_sapiens 0 887
ENST00000431927 TTC39A-009 processed_transcript Homo_sapiens 0 804
ENST00000439482 TTC39A-006 protein_coding Homo_sapiens 0 1064
ENST00000447632 TTC39A-004 protein_coding Homo_sapiens 0 1775
ENST00000524442 TTC39A-016 processed_transcript Homo_sapiens 0 473
ENST00000525906 TTC39A-018 protein_coding Homo_sapiens 0 433
ENST00000527205 TTC39A-011 protein_coding Homo_sapiens 0 470
ENST00000530004 TTC39A-013 protein_coding Homo_sapiens 0 963
ENST00000532836 TTC39A-015 protein_coding Homo_sapiens 0 477
ENST00000534098 TTC39A-014 processed_transcript Homo_sapiens 0 832

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