| Transcript ID | Muscle | Ovary | Testis |
|---|---|---|---|
| ENSMUST00000064190 | 2.755±0.68 | 6.018±0.00 | 0.585±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | retinoic acid induced 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000064190  |
Rai1-201 |
ENSMUSG00000062115 |
10090 | + |
11:60105013-60199195  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009A0 | CIL_0009A0_0002 | VISTA | 11:59693037-60296757 |
| CIL_0000NM | CIL_0000NM_0002 | CGP | 11:59970614-60199197 |
| CIL_00003U | CIL_00003U_0003 | CGP | 11:60105013-60222581 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001501 | IMP | skeletal system development |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0006357 | IDA | regulation of transcription from RNA polymerase II promoter |
| GO:0008270 | IEA | zinc ion binding |
| GO:0032922 | IMP | circadian regulation of gene expression |
| GO:0035326 | ISS | enhancer binding |
| GO:0040015 | IMP | negative regulation of multicellular organism growth |
| GO:0045893 | ISS | positive regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000353383
|
RAI1-001 | protein_coding | Homo_sapiens | 0 | 4516 |
|
ENST00000395774
|
RAI1-002 | protein_coding | Homo_sapiens | 0 | 2499 |
|
ENST00000471135
|
RAI1-006 | protein_coding | Homo_sapiens | 0 | 351 |
|
ENST00000485080
|
SREBF1-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 433 |
|
ENST00000489697
|
RAI1-004 | processed_transcript | Homo_sapiens | 0.0000000000005 | 81 |
|
ENST00000583166
|
RAI1-008 | protein_coding | Homo_sapiens | 0 | 228 |
