C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sterol regulatory element binding transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485080 SREBF1-016 ENSG00000072310 9606 - 17:17810399-17813769 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NM CIL_0000NM_0001 CGP 17:17505563-17811453
CIL_00003U CIL_00003U_0002 CGP 17:17681473-17837002
CIL_00003N CIL_00003N_0002 CGP 17:17810399-17972422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102688 Rai1-005 protein_coding Mus_musculus 0 436
ENSMUST00000149770 Rai1-002 processed_transcript Mus_musculus 0 436
ENSMUST00000171108 Rai1-202 protein_coding Mus_musculus 0 433
ENSMUST00000064190 Rai1-201 protein_coding Mus_musculus 0 433
ENSMUST00000020846 Srebf1-005 protein_coding Mus_musculus 2e-26 124
ENSMUST00000134660 Srebf1-006 protein_coding Mus_musculus 2e-26 124

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