C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA terminal phosphate cyclase-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064393 Rcl1-201 ENSMUSG00000024785 10090 + 19:29101375-29143843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064393
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064393 15.099±2.80 36.807±1.39 10.179±0.66 6.122±0.76 13.116±5.22 6.684±1.41 2.244±0.48 7.703±0.58 28.281±6.40 7.514±0.73 2.997±0.79 15.652±5.09 18.997±9.80 2.031±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YJ CIL_0003YJ_0002 CGP 19:29020833-29143843
CIL_0000NF CIL_0000NF_0002 CGP 19:29101375-29313080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0006364 ISA rRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000381728 RCL1-006 protein_coding Homo_sapiens 0 680
ENST00000381730 RCL1-002 protein_coding Homo_sapiens 0 680
ENST00000381732 RCL1-004 protein_coding Homo_sapiens 0 510
ENST00000381750 RCL1-001 protein_coding Homo_sapiens 0 1389
ENST00000441844 RCL1-007 protein_coding Homo_sapiens 0 466
ENST00000442869 RCL1-003 protein_coding Homo_sapiens 0 750
ENST00000448872 RCL1-201 protein_coding Homo_sapiens 0 680
ENST00000473230 RCL1-005 processed_transcript Homo_sapiens 0 291
ENST00000615460 RCL1-202 protein_coding Homo_sapiens 0 885
ENST00000623584 RCL1-203 protein_coding Homo_sapiens 0 885

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