| Transcript ID | Colon | Liver | Muscle | Ovary |
|---|---|---|---|---|
| ENSMUST00000064991 | 1.925±0.25 | 0.530±0.14 | 1.542±0.19 | 4.662±0.80 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sex comb on midleg homolog 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000064991  |
Scmh1-201 |
ENSMUSG00000000085 |
10090 | + |
4:120453243-120530162  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000876 | CIL_000876_0002 | VISTA | 4:120091603-120693946 |
| CIL_0009C0 | CIL_0009C0_0002 | VISTA | 4:120091667-120696253 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA:IC | nucleus |
| GO:0006338 | IMP | chromatin remodeling |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0007283 | IGI | spermatogenesis |
| GO:0009952 | IMP | anterior/posterior pattern specification |
| GO:0010369 | IDA | chromocenter |
| GO:0016458 | ISS | gene silencing |
| GO:0045892 | IC | negative regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000326197
|
SCMH1-005 | protein_coding | Homo_sapiens | 0 | 2734 |
|
ENST00000337495
|
SCMH1-003 | protein_coding | Homo_sapiens | 0 | 2050 |
|
ENST00000361191
|
SCMH1-201 | protein_coding | Homo_sapiens | 0 | 1914 |
|
ENST00000361705
|
SCMH1-202 | protein_coding | Homo_sapiens | 0 | 1917 |
|
ENST00000372595
|
SCMH1-004 | protein_coding | Homo_sapiens | 0 | 2492 |
|
ENST00000372596
|
SCMH1-002 | protein_coding | Homo_sapiens | 0 | 2045 |
|
ENST00000372597
|
SCMH1-001 | protein_coding | Homo_sapiens | 0 | 1917 |
|
ENST00000397171
|
SCMH1-203 | protein_coding | Homo_sapiens | 0 | 2045 |
|
ENST00000397174
|
SCMH1-204 | protein_coding | Homo_sapiens | 0 | 2617 |
|
ENST00000402904
|
SCMH1-205 | protein_coding | Homo_sapiens | 0 | 2486 |
|
ENST00000456518
|
SCMH1-012 | protein_coding | Homo_sapiens | 0 | 1129 |
|
ENST00000460215
|
SCMH1-010 | processed_transcript | Homo_sapiens | 2.94273e-44 | 182 |
|
ENST00000472037
|
SCMH1-006 | protein_coding | Homo_sapiens | 0 | 518 |
|
ENST00000482530
|
SCMH1-009 | processed_transcript | Homo_sapiens | 0 | 595 |
|
ENST00000489421
|
SCMH1-007 | processed_transcript | Homo_sapiens | 0 | 351 |
|
ENST00000498793
|
SCMH1-008 | processed_transcript | Homo_sapiens | 0 | 538 |
