C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA zinc finger domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065169 Gatad2a-201 ENSMUSG00000036180 10090 - 8:69907069-69996379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065169 3.724±0.34 6.982±0.75 2.477±0.00 2.069±0.00 4.125±0.39 7.189±1.26 1.126±0.22 3.402±0.55 2.257±0.67 4.643±0.54 0.669±0.00 5.876±1.50 4.879±1.20 5.209±1.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001701 IMP in utero embryonic development
GO:0001842 IMP neural fold formation
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0010172 IMP embryonic body morphogenesis
GO:0012501 IMP programmed cell death
GO:0016581 IEA NuRD complex
GO:0021506 IMP anterior neuropore closure
GO:0030674 IEA protein binding, bridging
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358713 GATAD2A-001 protein_coding Homo_sapiens 0 1779
ENST00000360315 GATAD2A-201 protein_coding Homo_sapiens 0 1779
ENST00000404158 GATAD2A-002 protein_coding Homo_sapiens 0 1825
ENST00000418032 GATAD2A-003 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000609040 GATAD2A-011 nonsense_mediated_decay Homo_sapiens 0 987

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