C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA zinc finger domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360315 GATAD2A-201 ENSG00000167491 9606 + 19:19385833-19508931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360315
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360315 9.719±0.00 3.727±0.00 6.212±0.00 4.779±0.00 0.165±0.00 8.871±0.00 2.096±0.00 6.922±0.00 3.267±0.00 8.666±2.75 7.069±4.50 5.191±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NR CIL_0004NR_0002 CGP 19:19385826-19515685

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IEA blood vessel development
GO:0001701 IEA in utero embryonic development
GO:0001842 IEA neural fold formation
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006306 TAS DNA methylation
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0010172 IEA embryonic body morphogenesis
GO:0012501 IEA programmed cell death
GO:0016581 IDA NuRD complex
GO:0021506 IEA anterior neuropore closure
GO:0030674 IDA protein binding, bridging
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065169 Gatad2a-201 protein_coding Mus_musculus 0 1779
ENSMUST00000116463 Gatad2a-202 protein_coding Mus_musculus 0 1764
ENSMUST00000177851 Gatad2a-203 protein_coding Mus_musculus 0 1764

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