C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 204, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065286 Fam204a-201 ENSMUSG00000057858 10090 - 19:60198586-60226697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065286 1.636±0.18 3.105±1.44 4.219±0.37 4.874±1.34 2.032±1.25 1.497±0.85 0.971±0.13 1.080±0.36 1.626±1.19 1.502±0.38 3.902±0.31 4.126±2.75 2.158±0.63 1.959±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KI CIL_0007KI_0003 UCNEbase 19:59043463-60359839
CIL_0008MJ CIL_0008MJ_0002 VISTA 19:59715442-60316837
CIL_0004H4 CIL_0004H4_0003 CGP 19:59902884-60226697
CIL_0008IJ CIL_0008IJ_0002 VISTA 19:59903058-60504722
CIL_0003M4 CIL_0003M4_0002 CGP 19:60198586-60468304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369170 FAM204A-007 protein_coding Homo_sapiens 0 353
ENST00000369171 FAM204BP-001 processed_pseudogene Homo_sapiens 0 614
ENST00000369172 FAM204A-006 protein_coding Homo_sapiens 0 741
ENST00000369183 FAM204A-005 protein_coding Homo_sapiens 0 789
ENST00000467890 FAM204A-002 retained_intron Homo_sapiens 0 313
ENST00000469758 FAM204A-008 processed_transcript Homo_sapiens 0 294
ENST00000470476 FAM204A-004 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000490048 FAM204A-011 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000491416 FAM204A-001 processed_transcript Homo_sapiens 0 440
ENST00000554513 RP11-463C8.5-001 processed_pseudogene Homo_sapiens 0 383

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