C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 53, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065371 Fam53b-006 ENSMUSG00000030956 10090 - 7:132712084-132786919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000065371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065371 6.588±3.67 32.438±15.40 2.959±0.00 2.694±0.59 7.630±1.65 3.117±0.00 1.982±0.53 4.632±3.54 8.259±3.75 2.434±0.55 6.116±1.82 2.236±1.54 1.245±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00084V CIL_00084V_0002 VISTA 7:132507589-133108550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280780 FAM53B-003 protein_coding Homo_sapiens 0 1066
ENST00000337318 FAM53B-001 protein_coding Homo_sapiens 0 1356
ENST00000392754 FAM53B-004 protein_coding Homo_sapiens 0 1356
ENST00000494792 RP11-12J10.3-001 nonsense_mediated_decay Homo_sapiens 0 1064

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