C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494792 RP11-12J10.3-001 ENSG00000258539 9606 - 10:124617080-124791727 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084V CIL_00084V_0001 VISTA 10:124437964-125038882
CIL_0001V3 CIL_0001V3_0001 CGP 10:124447023-124617888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006400 IEA tRNA modification
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0008176 IEA tRNA (guanine-N7-)-methyltransferase activity
GO:0008276 IEA protein methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106165 Fam53b-003 protein_coding Mus_musculus 0 1066
ENSMUST00000106166 Fam53b-007 protein_coding Mus_musculus 0 1066
ENSMUST00000106169 Fam53b-004 protein_coding Mus_musculus 0 1064
ENSMUST00000065371 Fam53b-006 protein_coding Mus_musculus 0 1064
ENSMUST00000097999 Fam53b-001 protein_coding Mus_musculus 0 1064
ENSMUST00000106168 Fam53b-008 protein_coding Mus_musculus 0 957
ENSMUST00000033257 Mettl10-001 protein_coding Mus_musculus 0 824
ENSMUST00000152410 Mettl10-003 nonsense_mediated_decay Mus_musculus 0 675
ENSMUST00000141920 Mettl10-005 nonsense_mediated_decay Mus_musculus 0 416
ENSMUST00000135932 Mettl10-006 processed_transcript Mus_musculus 0 364
ENSMUST00000154914 Mettl10-004 processed_transcript Mus_musculus 0 272
ENSMUST00000120425 Mettl10-002 protein_coding Mus_musculus 0 272
ENSMUST00000134946 Fam53b-009 protein_coding Mus_musculus 0 255

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