C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066027 Dgcr6-006 ENSMUSG00000003531 10090 + 16:18066443-18071358 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066027 8.654±0.54 33.875±6.61 17.387±0.22 10.965±0.53 10.780±0.31 6.340±1.19 7.711±1.44 16.739±2.02 7.407±5.34 7.245±1.36 5.764±0.71 15.983±1.87 2.557±0.97 65.095±28.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0005EQ CIL_0005EQ_0003 CGP 16:18052860-18090203

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248879 DGCR6L-001 protein_coding Homo_sapiens 0 654
ENST00000405465 DGCR6L-002 protein_coding Homo_sapiens 0 257
ENST00000443409 DGCR6L-003 nonsense_mediated_decay Homo_sapiens 0 331

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