C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nescient helix loop helix 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066187 Nhlh2-201 ENSMUSG00000048540 10090 + 3:102010145-102015492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000066187
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000066187 0.012±0.00 4.599±3.15 0.025±0.00 0.018±0.01 0.018±0.01 0.012±0.01 0.031±0.00 0.072±0.03 0.006±0.00 0.038±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0002 VISTA 3:101762054-102363652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001102 IEA RNA polymerase II activating transcription factor binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007617 IMP mating behavior
GO:0030154 IEA cell differentiation
GO:0042698 IMP ovulation cycle
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320238 NHLH2-002 protein_coding Homo_sapiens 0 850
ENST00000369506 NHLH2-001 protein_coding Homo_sapiens 0 671
ENST00000429731 NHLH2-003 protein_coding Homo_sapiens 0 590

Loading