C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leprecan-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066489 Leprel4-001 ENSMUSG00000006931 10090 - 11:100408456-100414836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066489 15.753±10.39 33.234±10.00 33.641±3.43 6.719±2.98 11.894±3.65 10.977±2.04 13.858±1.17 4.820±1.43 1.600±1.28 18.591±6.87 1.532±0.19 63.883±36.12 12.391±5.46 3.146±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NQ CIL_0005NQ_0002 CGP 11:100368958-100414836
CIL_0003K6 CIL_0003K6_0003 CGP 11:100408456-100424824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320954 CRTAP-001 protein_coding Homo_sapiens 7e-27 128
ENST00000355468 LEPREL4-001 protein_coding Homo_sapiens 0 1548
ENST00000393928 LEPREL4-201 protein_coding Homo_sapiens 0 1548
ENST00000449224 CRTAP-003 protein_coding Homo_sapiens 2e-27 128
ENST00000467164 LEPREL4-004 retained_intron Homo_sapiens 0 612
ENST00000479399 DCTN3-002 processed_transcript Homo_sapiens 0.00005 55
ENST00000590496 LEPREL4-007 protein_coding Homo_sapiens 0 368
ENST00000592026 LEPREL4-006 protein_coding Homo_sapiens 0 527

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