C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173801-ENSG00000141696 CGP 9606 17:41754604-41812604
GeneTranscriptPositionBiotype
ENSG00000141696 (LEPREL4)
leprecan-like 4 		ENST00000355468 (LEPREL4-001) 41801947-41812603 protein_coding
ENST00000393928 (LEPREL4-201) 41801954-41812199 protein_coding
ENST00000465097 (LEPREL4-002) 41802320-41806848 nonsense_mediated_decay
ENST00000467164 (LEPREL4-004) 41810681-41811669 retained_intron
ENST00000484247 (LEPREL4-003) 41801954-41807490 retained_intron
ENST00000587455 (LEPREL4-005) 41806825-41811160 retained_intron
ENST00000590496 (LEPREL4-007) 41811661-41812604 protein_coding
ENST00000592026 (LEPREL4-006) 41806796-41811560 protein_coding
ENSG00000173801 (JUP)
junction plakoglobin 		ENST00000310706 (JUP-001) 41754604-41786698 protein_coding
ENST00000393930 (JUP-004) 41754604-41785155 protein_coding
ENST00000393931 (JUP-008) 41754604-41786698 protein_coding
ENST00000420370 (JUP-007) 41767458-41772269 protein_coding
ENST00000424457 (JUP-003) 41768969-41786712 protein_coding
ENST00000437187 (JUP-002) 41767401-41786931 protein_coding
ENST00000437369 (JUP-009) 41769626-41785155 protein_coding
ENST00000449889 (JUP-006) 41767395-41786070 protein_coding
ENST00000465293 (JUP-005) 41771847-41786209 protein_coding
ENST00000585793 (JUP-011) 41758172-41763077 retained_intron
ENST00000589036 (JUP-010) 41771417-41786710 retained_intron
ENST00000591690 (JUP-012) 41769574-41786765 protein_coding
CIL_0005NQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001552-ENSMUSG00000006931 CGP 10090 11:100368958-100414836
GeneTranscriptPositionBiotype
ENSMUSG00000001552 (Jup)
junction plakoglobin 		ENSMUST00000001592 (Jup-001) 100370619-100397749 protein_coding
ENSMUST00000107403 (Jup-002) 100372296-100397749 protein_coding
ENSMUST00000123903 (Jup-009) 100383404-100386770 processed_transcript
ENSMUST00000124659 (Jup-003) 100368958-100372716 processed_transcript
ENSMUST00000128268 (Jup-008) 100383395-100386741 processed_transcript
ENSMUST00000149798 (Jup-004) 100381297-100383092 processed_transcript
ENSMUST00000151476 (Jup-005) 100371059-100374125 processed_transcript
ENSMUST00000152774 (Jup-006) 100372357-100373308 processed_transcript
ENSMUST00000155746 (Jup-007) 100383315-100397763 processed_transcript
ENSMUSG00000006931 (Leprel4)
leprecan-like 4 		ENSMUST00000066489 (Leprel4-001) 100408456-100414836 protein_coding
ENSMUST00000141840 (Leprel4-002) 100409366-100411874 protein_coding
ENSMUSG00000086031 (Gm12348)
predicted gene 12348 		ENSMUST00000138915 (Gm12348-001) 100401508-100402252 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NQ_0001ENSG00000141696ENST00000355468ENST00000393928ENST00000465097ENST00000467164ENST00000484247ENST00000587455ENST00000590496ENST00000592026ENSG00000173801ENST00000310706ENST00000393930ENST00000393931ENST00000420370ENST00000424457ENST00000437187ENST00000437369ENST00000449889ENST00000465293ENST00000585793ENST00000589036ENST00000591690CIL_0005NQ_0002ENSMUSG00000001552ENSMUST00000001592ENSMUST00000107403ENSMUST00000123903ENSMUST00000124659ENSMUST00000128268ENSMUST00000149798ENSMUST00000151476ENSMUST00000152774ENSMUST00000155746ENSMUSG00000006931ENSMUST00000066489ENSMUST00000141840ENSMUSG00000086031ENSMUST00000138915
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NQ_0001ENSG00000141696ENST00000355468ENST00000393928ENST00000465097ENST00000467164ENST00000484247ENST00000590496ENST00000592026ENSG00000173801ENST00000310706ENST00000393930ENST00000393931ENST00000591690CIL_0005NQ_0002ENSMUSG00000001552ENSMUST00000001592ENSMUST00000107403ENSMUST00000155746ENSMUSG00000006931ENSMUST00000066489ENSMUST00000141840ENSMUSG00000086031ENSMUST00000138915
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141696 ENST00000355468 0.342±0.00 N/A N/A N/A 0.444±0.00 0.421±0.00 N/A 1.668±0.00 N/A N/A N/A 5.701±4.55 N/A 0.919±0.00
ENST00000393928 0.756±0.00 4.118±0.00 N/A 0.110±0.00 1.938±0.00 1.557±0.00 N/A 3.127±0.00 0.292±0.00 N/A N/A 10.739±6.85 3.857±0.00 5.574±0.00
ENST00000465097 1.241±0.00 2.763±0.00 N/A N/A 2.523±0.00 1.896±0.00 0.701±0.00 N/A 0.353±0.00 1.349±0.00 1.347±0.89 43.736±0.00 13.057±0.00 2.494±0.00
ENST00000467164 N/A N/A 0.813±0.00 N/A 0.817±0.00 N/A N/A N/A 1.093±0.00 0.239±0.00 N/A N/A N/A N/A
ENST00000484247 N/A N/A 0.398±0.00 0.369±0.00 N/A N/A 0.202±0.00 0.307±0.00 0.262±0.00 N/A N/A N/A N/A N/A
ENST00000587455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590496 N/A N/A 0.984±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592026 1.680±0.00 N/A N/A N/A N/A N/A 1.617±0.00 N/A N/A 2.332±0.00 6.120±0.00 N/A N/A N/A
ENSG00000173801 ENST00000310706 38.771±0.00 10.218±0.00 1.875±0.00 3.574±2.92 16.045±15.08 6.814±0.00 22.072±18.65 27.034±21.36 9.570±7.14 21.503±17.71 37.555±0.00 179.173±163.83 53.569±20.83 6.383±2.92
ENST00000393930 N/A N/A 1.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393931 13.900±0.00 7.513±0.00 N/A 1.446±0.00 16.395±0.00 5.821±4.82 9.563±8.33 23.630±0.00 6.577±0.00 14.254±0.00 4.682±0.00 47.627±38.61 24.887±11.20 7.379±0.00
ENST00000420370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591690 N/A N/A N/A N/A N/A N/A N/A N/A 4.878±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001552 ENSMUST00000001592 24.965±15.47 35.541±4.49 34.893±7.19 14.633±7.62 29.001±15.89 109.093±8.93 49.921±17.01 54.098±18.19 11.341±7.87 155.514±10.70 15.578±5.31 37.925±13.15 121.771±97.86 4.599±0.41
ENSMUST00000107403 10.355±0.41 19.105±5.84 N/A 15.155±7.88 29.686±4.76 78.920±18.18 19.268±1.94 18.361±0.00 5.362±1.48 89.307±15.08 N/A 34.012±7.45 296.127±23.39 13.062±3.61
ENSMUST00000123903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155746 N/A 74.726±5.42 N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.642±3.12 N/A N/A
ENSMUSG00000006931 ENSMUST00000066489 15.753±10.39 33.234±10.00 33.641±3.43 6.719±2.98 11.894±3.65 10.977±2.04 13.858±1.17 4.820±1.43 1.600±1.28 18.591±6.87 1.532±0.19 63.883±36.12 12.391±5.46 3.146±1.72
ENSMUST00000141840 N/A N/A N/A 18.540±0.00 N/A N/A N/A N/A N/A N/A N/A 90.873±35.31 36.961±14.95 6.924±0.00
ENSMUSG00000086031 ENSMUST00000138915 N/A 0.891±0.00 N/A 0.611±0.21 N/A N/A N/A N/A 0.215±0.09 0.342±0.00 N/A 2.106±2.04 0.493±0.36 3.929±1.89

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