C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A oxidase 1, palmitoyl
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066587 Acox1-001 ENSMUSG00000020777 10090 - 11:116171888-116199045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066587
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066587 57.810±33.81 12.666±3.60 11.364±0.37 18.117±2.37 22.673±7.96 11.534±2.92 28.350±2.18 22.636±5.18 33.820±34.49 12.717±1.81 33.615±1.81 9.877±4.57 12.245±1.63 3.424±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078W CIL_00078W_0002 CGP 11:116142285-116199045
CIL_00078M CIL_00078M_0002 CGP 11:116171888-116215318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IEA very long-chain fatty acid metabolic process
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 TAS acyl-CoA oxidase activity
GO:0005102 IEA receptor binding
GO:0005504 IEA fatty acid binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0006091 IEA generation of precursor metabolites and energy
GO:0006629 IEA lipid metabolic process
GO:0006635 TAS fatty acid beta-oxidation
GO:0006693 IEA prostaglandin metabolic process
GO:0007283 IMP spermatogenesis
GO:0016020 IEA membrane
GO:0016401 IEA palmitoyl-CoA oxidase activity
GO:0016559 IEA peroxisome fission
GO:0019395 IMP fatty acid oxidation
GO:0030165 ISO PDZ domain binding
GO:0033540 IEA fatty acid beta-oxidation using acyl-CoA oxidase
GO:0047485 IEA protein N-terminus binding
GO:0055088 IEA lipid homeostasis
GO:0071949 IEA FAD binding
GO:2000189 IEA positive regulation of cholesterol homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293217 ACOX1-001 protein_coding Homo_sapiens 0 1932
ENST00000301608 ACOX1-002 protein_coding Homo_sapiens 0 1650
ENST00000572047 ACOX1-004 nonsense_mediated_decay Homo_sapiens 0 1855
ENST00000573078 ACOX1-003 nonsense_mediated_decay Homo_sapiens 0 1652
ENST00000587927 ACOX1-009 protein_coding Homo_sapiens 0 320
ENST00000588968 ACOX1-014 protein_coding Homo_sapiens 0 311
ENST00000591857 ACOX1-010 processed_transcript Homo_sapiens 0 617

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