C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2 domain containing 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066594 Sh2d4a-001 ENSMUSG00000053886 10090 + 8:68276567-68347694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066594
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066594 2.408±0.34 2.950±0.92 8.522±1.27 0.112±0.04 2.575±0.50 12.261±0.92 2.430±1.08 5.600±0.37 3.701±1.62 6.816±0.61 0.602±0.12 7.122±1.97 3.207±2.04 1.430±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EP CIL_0004EP_0002 CGP 8:67689082-68347694
CIL_0003IX CIL_0003IX_0002 CGP 8:68276567-68735146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0010923 ISS negative regulation of phosphatase activity
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265807 SH2D4A-001 protein_coding Homo_sapiens 0 399
ENST00000519207 SH2D4A-003 protein_coding Homo_sapiens 0 399
ENST00000523736 SH2D4A-006 protein_coding Homo_sapiens 0 350

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