C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbonic anhydrase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066674 Car8-001 ENSMUSG00000041261 10090 - 4:8143362-8239041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066674
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066674 0.565±0.32 4.013±0.70 0.377±0.11 0.541±0.07 1.021±0.41 4.481±1.43 2.579±0.32 1.362±0.07 7.015±5.31 14.218±1.69 1.129±0.17 0.173±0.07 0.179±0.06 0.089±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G3 CIL_0003G3_0002 CGP 4:6686353-8239041
CIL_0003G7 CIL_0003G7_0002 CGP 4:8143362-8607778

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0048015 IDA phosphatidylinositol-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317995 CA8-001 protein_coding Homo_sapiens 0 1243
ENST00000524872 CA8-003 retained_intron Homo_sapiens 0 1123
ENST00000528666 CA8-004 processed_transcript Homo_sapiens 0 429
ENST00000529918 CA8-002 retained_intron Homo_sapiens 0 523

Loading