C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003G3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198846-ENSG00000178538 CGP 9606 8:58805418-60281412
GeneTranscriptPositionBiotype
ENSG00000167912 (RP11-25K19.1)
 ENST00000517898 (RP11-25K19.1-002) 59119946-59121315 antisense
ENST00000518993 (RP11-25K19.1-001) 59119218-59121346 antisense
ENST00000523683 (RP11-25K19.1-003) 59119040-59120031 antisense
ENSG00000178538 (CA8)
carbonic anhydrase VIII 		ENST00000317995 (CA8-001) 60187347-60281412 protein_coding
ENST00000524872 (CA8-003) 60208071-60281385 retained_intron
ENST00000528666 (CA8-004) 60222649-60232673 processed_transcript
ENST00000529918 (CA8-002) 60264822-60281324 retained_intron
ENSG00000198846 (TOX)
thymocyte selection-associated high mobility group box 		ENST00000361421 (TOX-001) 58805418-59119208 protein_coding
ENSG00000253260 (RP11-379I19.1)
 ENST00000521456 (RP11-379I19.1-001) 59561327-59593701 lincRNA
ENSG00000253413 (RP11-960H2.2)
 ENST00000522215 (RP11-960H2.2-001) 59760047-59760263 processed_pseudogene
ENSG00000253879 (RP11-379I19.3)
 ENST00000521274 (RP11-379I19.3-002) 59601404-59613775 lincRNA
ENST00000522898 (RP11-379I19.3-001) 59601378-59607005 lincRNA
ENSG00000254048 (RP11-328K2.1)
 ENST00000518011 (RP11-328K2.1-001) 58991720-58992938 sense_intronic
ENSG00000254775 (RP11-27P7.1)
 ENST00000531077 (RP11-27P7.1-001) 60049587-60074715 lincRNA
CIL_0003G3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041272-ENSMUSG00000041261 CGP 10090 4:6686353-8239041
GeneTranscriptPositionBiotype
ENSMUSG00000041261 (Car8)
carbonic anhydrase 8 		ENSMUST00000066674 (Car8-001) 8143362-8239041 protein_coding
ENSMUSG00000041272 (Tox)
thymocyte selection-associated high mobility group box 		ENSMUST00000039987 (Tox-001) 6686353-6990799 protein_coding
ENSMUST00000125974 (Tox-003) 6688046-6689351 processed_transcript
ENSMUST00000147657 (Tox-002) 6740230-6991557 retained_intron
ENSMUST00000150082 (Tox-004) 6820694-6990483 retained_intron
ENSMUSG00000079993 (Gm11799)
predicted gene 11799 		ENSMUST00000116110 (Gm11799-001) 8166894-8167353 processed_pseudogene
ENSMUSG00000082024 (Gm11794)
predicted gene 11794 		ENSMUST00000119446 (Gm11794-001) 7763264-7763500 processed_pseudogene
ENSMUSG00000083023 (Gm11804)
predicted gene 11804 		ENSMUST00000121663 (Gm11804-001) 7039047-7039514 processed_pseudogene
ENSMUSG00000083068 (Gm11800)
predicted gene 11800 		ENSMUST00000120050 (Gm11800-001) 8118620-8119736 processed_pseudogene
ENSMUSG00000085630 (Gm11795)
predicted gene 11795 		ENSMUST00000127180 (Gm11795-001) 7759670-7763930 lincRNA
ENSMUSG00000086052 (Gm11802)
predicted gene 11802 		ENSMUST00000137749 (Gm11802-001) 6688169-6704160 antisense
ENSMUSG00000086070 (8430436N08Rik)
RIKEN cDNA 8430436N08 gene 		ENSMUST00000129988 (8430436N08Rik-001) 7560688-7573801 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G3_0001ENSG00000167912ENST00000517898ENST00000518993ENST00000523683ENSG00000178538ENST00000317995ENST00000524872ENST00000528666ENST00000529918ENSG00000198846ENST00000361421ENSG00000253260ENST00000521456ENSG00000253413ENST00000522215ENSG00000253879ENST00000521274ENST00000522898ENSG00000254048ENST00000518011ENSG00000254775ENST00000531077CIL_0003G3_0002ENSMUSG00000041261ENSMUST00000066674ENSMUSG00000041272ENSMUST00000039987ENSMUST00000125974ENSMUST00000147657ENSMUST00000150082ENSMUSG00000079993ENSMUST00000116110ENSMUSG00000082024ENSMUST00000119446ENSMUSG00000083023ENSMUST00000121663ENSMUSG00000083068ENSMUST00000120050ENSMUSG00000085630ENSMUST00000127180ENSMUSG00000086052ENSMUST00000137749ENSMUSG00000086070ENSMUST00000129988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G3_0001ENSG00000167912ENST00000517898ENST00000518993ENSG00000178538ENST00000317995ENST00000524872ENST00000528666ENST00000529918ENSG00000198846ENST00000361421ENSG00000253260ENST00000521456ENSG00000253413ENST00000522215ENSG00000253879ENST00000521274ENST00000522898ENSG00000254048ENST00000518011ENSG00000254775ENST00000531077CIL_0003G3_0002ENSMUSG00000041261ENSMUST00000066674ENSMUSG00000041272ENSMUST00000039987ENSMUST00000125974ENSMUST00000147657ENSMUSG00000079993ENSMUST00000116110ENSMUSG00000082024ENSMUST00000119446ENSMUSG00000083023ENSMUST00000121663ENSMUSG00000083068ENSMUST00000120050ENSMUSG00000085630ENSMUST00000127180ENSMUSG00000086052ENSMUST00000137749ENSMUSG00000086070ENSMUST00000129988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167912 ENST00000517898 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.690±0.51 N/A N/A
ENST00000518993 N/A 0.890±0.00 N/A N/A N/A 2.328±0.00 N/A 0.935±0.00 0.090±0.00 0.680±0.00 N/A N/A N/A N/A
ENST00000523683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178538 ENST00000317995 0.773±0.00 0.210±0.00 N/A 1.230±0.10 0.595±0.00 1.437±0.00 0.518±0.14 2.873±0.00 N/A 1.092±0.86 0.365±0.00 0.364±0.25 2.677±1.28 1.632±0.48
ENST00000524872 0.316±0.00 0.268±0.00 0.873±0.00 1.975±0.87 0.548±0.00 0.342±0.00 0.249±0.12 N/A 0.308±0.00 1.095±0.46 N/A 0.532±0.00 2.141±1.34 1.362±0.00
ENST00000528666 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A 1.850±0.00 N/A N/A
ENST00000529918 N/A N/A N/A N/A 0.941±0.00 0.257±0.00 0.224±0.00 N/A N/A N/A 0.958±0.00 N/A N/A N/A
ENSG00000198846 ENST00000361421 0.211±0.00 1.416±0.00 0.249±0.00 4.467±2.21 0.412±0.00 3.149±1.46 0.140±0.03 0.604±0.59 0.322±0.25 1.159±0.53 0.016±0.00 0.743±0.47 0.876±0.31 1.885±0.10
ENSG00000253260 ENST00000521456 N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A 0.119±0.00 0.286±0.00
ENSG00000253413 ENST00000522215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00
ENSG00000253879 ENST00000521274 N/A N/A N/A N/A N/A N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A 0.212±0.18
ENST00000522898 N/A 0.158±0.00 N/A 0.034±0.00 0.016±0.00 N/A 0.016±0.00 0.419±0.00 0.076±0.00 N/A N/A N/A N/A 0.163±0.05
ENSG00000254048 ENST00000518011 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A 0.200±0.06
ENSG00000254775 ENST00000531077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.449±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041261 ENSMUST00000066674 0.565±0.32 4.013±0.70 0.377±0.11 0.541±0.07 1.021±0.41 4.481±1.43 2.579±0.32 1.362±0.07 7.015±5.31 14.218±1.69 1.129±0.17 0.173±0.07 0.179±0.06 0.089±0.05
ENSMUSG00000041272 ENSMUST00000039987 1.062±0.67 1.013±0.42 0.186±0.04 6.130±4.06 3.857±0.94 3.286±2.68 0.201±0.00 0.635±0.11 1.172±1.21 0.878±0.28 0.020±0.01 2.274±0.92 0.048±0.02 1.268±0.33
ENSMUST00000125974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A 3.251±0.51
ENSMUST00000147657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENSMUST00000150082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079993 ENSMUST00000116110 N/A 0.634±0.38 0.051±0.00 0.097±0.00 0.294±0.00 0.857±0.01 0.120±0.00 0.179±0.05 0.267±0.28 0.735±0.33 0.078±0.00 N/A N/A N/A
ENSMUSG00000082024 ENSMUST00000119446 N/A N/A N/A 0.363±0.00 N/A N/A N/A N/A 0.309±0.00 N/A 0.483±0.00 N/A N/A N/A
ENSMUSG00000083023 ENSMUST00000121663 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083068 ENSMUST00000120050 0.116±0.04 0.107±0.00 0.019±0.00 0.072±0.00 0.089±0.00 N/A 0.113±0.03 0.070±0.01 0.054±0.00 0.256±0.11 N/A 0.154±0.05 0.068±0.02 0.418±0.15
ENSMUSG00000085630 ENSMUST00000127180 0.135±0.00 0.425±0.17 N/A 0.086±0.05 0.275±0.10 N/A N/A N/A N/A N/A N/A 0.172±0.00 0.146±0.08 1.238±0.55
ENSMUSG00000086052 ENSMUST00000137749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.09 5.402±0.48
ENSMUSG00000086070 ENSMUST00000129988 0.070±0.00 N/A 0.008±0.00 0.007±0.00 0.082±0.03 0.290±0.00 N/A N/A N/A N/A 0.052±0.02 0.023±0.00 0.015±0.00 0.045±0.01

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