C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: free fatty acid receptor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067098 Ffar4-201 ENSMUSG00000054200 10090 + 19:38097079-38114263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067098 17.818±8.22 9.044±2.64 0.775±0.26 0.055±0.00 21.196±4.09 51.155±17.24 0.609±0.47 0.980±0.17 1.374±2.66 13.232±2.27 0.135±0.11 1.824±0.84 0.128±0.12 0.736±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068O CIL_00068O_0002 CGP 19:38055025-38114263
CIL_000101 CIL_000101_0002 CGP 19:38097079-38125321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IDA G-protein coupled receptor activity
GO:0005504 IDA fatty acid binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0008527 IMP taste receptor activity
GO:0010827 IDA regulation of glucose transport
GO:0016021 IEA integral component of membrane
GO:0030139 IDA endocytic vesicle
GO:0043066 IMP negative regulation of apoptotic process
GO:0046879 IDA hormone secretion
GO:0050710 IDA negative regulation of cytokine secretion
GO:0050728 IDA negative regulation of inflammatory response
GO:0050912 IMP detection of chemical stimulus involved in sensory perception of taste
GO:0070374 IMP positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371481 FFAR4-001 protein_coding Homo_sapiens 0 1155
ENST00000371483 FFAR4-002 protein_coding Homo_sapiens 0 730
ENST00000604414 FFAR4-003 protein_coding Homo_sapiens 0 715

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