C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: free fatty acid receptor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371481 FFAR4-001 ENSG00000186188 9606 + 10:93566665-93590072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371481
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371481 0.316±0.00 0.266±0.00 0.255±0.00 2.450±0.04 0.614±0.07 0.079±0.01 0.110±0.00 0.149±0.10 0.400±0.25 0.011±0.00 0.303±0.34 0.119±0.03 0.239±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068O CIL_00068O_0001 CGP 10:93496632-93604480
CIL_000101 CIL_000101_0001 CGP 10:93566665-93604480

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005504 ISS fatty acid binding
GO:0005886 ISS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0010827 ISS regulation of glucose transport
GO:0016021 IEA integral component of membrane
GO:0043066 ISS negative regulation of apoptotic process
GO:0050710 ISS negative regulation of cytokine secretion
GO:0050728 ISS negative regulation of inflammatory response
GO:0070374 ISS positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067098 Ffar4-201 protein_coding Mus_musculus 0 1155
ENSMUST00000157025 Ctr9-003 retained_intron Mus_musculus 0.0002 53
ENSMUST00000152019 Ctr9-002 retained_intron Mus_musculus 0.0002 53

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