C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase inhibitor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067426 Cdkn3-201 ENSMUSG00000037628 10090 + 14:46760541-46771525 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067426
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067426 0.440±0.12 0.123±0.00 0.685±0.09 1.564±1.07 0.260±0.13 2.691±0.76 0.275±0.16 0.271±0.22 16.794±15.92 0.382±0.12 0.127±0.09 1.412±0.64 4.981±4.08 89.309±30.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0002 VISTA 14:46305651-46906520
CIL_00090Z CIL_00090Z_0002 VISTA 14:46310670-46911777
CIL_0005GF CIL_0005GF_0002 CGP 14:46383520-46771525
CIL_0000HQ CIL_0000HQ_0002 CGP 14:46760541-46788411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007050 IEA cell cycle arrest
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216414 CDKN3-005 processed_transcript Homo_sapiens 1.00053e-42 176
ENST00000335183 CDKN3-001 protein_coding Homo_sapiens 0 789
ENST00000395577 CDKN3-201 protein_coding Homo_sapiens 0 566
ENST00000442975 CDKN3-003 protein_coding Homo_sapiens 0 566
ENST00000458126 CDKN3-002 protein_coding Homo_sapiens 0 802
ENST00000541304 CDKN3-004 protein_coding Homo_sapiens 0 536
ENST00000543789 CDKN3-009 protein_coding Homo_sapiens 0 549
ENST00000555837 CDKN3-008 processed_transcript Homo_sapiens 0 544
ENST00000556102 CDKN3-010 protein_coding Homo_sapiens 0 684
ENST00000556305 CDKN3-011 processed_transcript Homo_sapiens 0 595
ENST00000611205 CDKN3-202 protein_coding Homo_sapiens 0 719

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