C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100526-ENSG00000100528 CGP 9606 14:54396849-54441431
GeneTranscriptPositionBiotype
ENSG00000100526 (CDKN3)
cyclin-dependent kinase inhibitor 3 		ENST00000216414 (CDKN3-005) 54399889-54420116 processed_transcript
ENST00000335183 (CDKN3-001) 54396955-54420218 protein_coding
ENST00000395577 (CDKN3-201) 54408564-54420214 protein_coding
ENST00000442975 (CDKN3-003) 54396995-54420212 protein_coding
ENST00000458126 (CDKN3-002) 54397000-54420218 protein_coding
ENST00000541304 (CDKN3-004) 54397029-54414219 protein_coding
ENST00000543789 (CDKN3-009) 54396979-54417951 protein_coding
ENST00000555837 (CDKN3-008) 54396849-54417951 processed_transcript
ENST00000556102 (CDKN3-010) 54397003-54420218 protein_coding
ENST00000556305 (CDKN3-011) 54399926-54418414 processed_transcript
ENST00000611205 (CDKN3-202) 54396955-54420214 protein_coding
ENST00000620759 (CDKN3-203) 54399888-54420116 protein_coding
ENSG00000100528 (CNIH1)
cornichon family AMPA receptor auxiliary protein 1 		ENST00000216416 (CNIH1-001) 54423560-54441431 protein_coding
ENST00000395573 (CNIH1-002) 54426936-54441391 protein_coding
ENST00000553660 (CNIH1-007) 54427425-54441357 protein_coding
ENST00000554683 (CNIH1-004) 54427595-54441344 nonsense_mediated_decay
ENST00000556113 (CNIH1-005) 54430158-54441340 protein_coding
ENST00000557659 (CNIH1-006) 54427329-54441376 nonsense_mediated_decay
ENST00000557690 (CNIH1-003) 54427523-54441391 protein_coding
CIL_0000HQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037628-ENSMUSG00000015759 CGP 10090 14:46760541-46788411
GeneTranscriptPositionBiotype
ENSMUSG00000015759 (Cnih1)
cornichon homolog 1 (Drosophila) 		ENSMUST00000015903 (Cnih1-001) 46775582-46788411 protein_coding
ENSMUST00000146629 (Cnih1-002) 46775582-46788411 nonsense_mediated_decay
ENSMUSG00000037628 (Cdkn3)
cyclin-dependent kinase inhibitor 3 		ENSMUST00000067426 (Cdkn3-201) 46760541-46771525 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HQ_0001ENSG00000100526ENST00000216414ENST00000335183ENST00000395577ENST00000442975ENST00000458126ENST00000541304ENST00000543789ENST00000555837ENST00000556102ENST00000556305ENST00000611205ENST00000620759ENSG00000100528ENST00000216416ENST00000395573ENST00000553660ENST00000554683ENST00000556113ENST00000557659ENST00000557690CIL_0000HQ_0002ENSMUSG00000015759ENSMUST00000015903ENSMUST00000146629ENSMUSG00000037628ENSMUST00000067426
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HQ_0001ENSG00000100526ENST00000216414ENST00000335183ENST00000395577ENST00000442975ENST00000458126ENST00000541304ENST00000543789ENST00000555837ENST00000556102ENST00000556305ENST00000611205ENST00000620759ENSG00000100528ENST00000216416ENST00000395573ENST00000553660ENST00000556113ENST00000557659ENST00000557690CIL_0000HQ_0002ENSMUSG00000015759ENSMUST00000015903ENSMUSG00000037628ENSMUST00000067426
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100526 ENST00000216414 N/A N/A N/A N/A N/A N/A 0.432±0.00 0.412±0.00 N/A N/A N/A 7.651±0.00 4.750±0.00 62.574±0.00
ENST00000335183 1.165±0.00 N/A N/A N/A 0.352±0.00 0.219±0.00 0.737±0.00 N/A N/A N/A N/A 3.539±0.00 1.059±0.29 32.927±0.03
ENST00000395577 0.885±0.00 0.674±0.00 N/A 1.500±0.00 N/A 4.348±3.32 0.295±0.20 N/A N/A N/A N/A 4.387±2.30 1.576±0.69 N/A
ENST00000442975 N/A N/A N/A 1.620±0.00 1.406±0.00 N/A 0.332±0.00 N/A N/A N/A N/A 1.177±0.00 N/A 38.850±0.00
ENST00000458126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.869±0.00 N/A 12.985±0.00
ENST00000541304 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543789 N/A N/A N/A 0.738±0.21 1.514±0.00 1.522±0.00 0.268±0.00 0.403±0.00 N/A N/A N/A 0.657±0.00 N/A N/A
ENST00000555837 0.695±0.00 1.415±0.00 N/A 0.706±0.18 0.980±0.31 0.659±0.00 N/A 0.303±0.00 0.080±0.00 0.215±0.00 N/A 1.456±0.42 0.458±0.00 30.451±0.00
ENST00000556102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 N/A N/A
ENST00000556305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.417±0.39 N/A N/A
ENST00000611205 N/A 1.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620759 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A
ENSG00000100528 ENST00000216416 8.407±0.00 2.190±0.00 1.683±0.00 3.835±0.48 5.853±2.43 2.262±1.31 1.494±0.62 5.747±0.00 7.077±1.86 3.530±0.16 0.747±0.13 4.094±1.31 2.429±0.17 4.190±2.53
ENST00000395573 N/A 6.441±0.00 N/A 5.168±0.00 11.274±0.00 17.490±0.00 5.547±0.00 15.615±0.00 16.944±0.00 7.812±0.00 3.672±2.90 7.039±1.64 12.977±2.53 14.325±0.00
ENST00000553660 N/A 6.690±0.00 2.022±0.00 N/A 7.165±0.00 10.925±4.07 4.961±3.09 14.316±0.00 17.213±0.00 7.594±0.00 6.980±0.00 20.871±9.44 20.782±5.94 20.229±0.00
ENST00000554683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.817±1.22 N/A N/A N/A
ENST00000557659 N/A N/A N/A N/A 4.553±0.00 N/A 1.337±0.00 5.869±0.00 N/A N/A N/A 12.842±4.07 19.030±0.00 12.263±0.00
ENST00000557690 N/A N/A 2.146±0.00 5.001±0.00 N/A N/A 2.318±0.00 7.218±0.00 N/A 5.241±0.00 N/A 8.082±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015759 ENSMUST00000015903 74.518±11.88 164.757±15.33 35.696±0.95 36.510±2.67 66.214±3.29 48.366±5.58 27.334±3.22 43.205±1.53 41.448±13.70 38.962±2.72 23.717±0.79 61.219±24.38 57.174±20.94 6.217±1.68
ENSMUST00000146629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037628 ENSMUST00000067426 0.440±0.12 0.123±0.00 0.685±0.09 1.564±1.07 0.260±0.13 2.691±0.76 0.275±0.16 0.271±0.22 16.794±15.92 0.382±0.12 0.127±0.09 1.412±0.64 4.981±4.08 89.309±30.63

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